RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 SMARCB1Q12824 385 aa14.09□□□□□ -0.15
R3HDM1-213ENST00000463230 MYO1EQ12965 1108 aa14.09□□□□□ -0.15
R3HDM1-213ENST00000463230 PPM1LQ5SGD2 360 aa14.09□□□□□ -0.15
R3HDM1-213ENST00000463230 RSPO2Q6UXX9 243 aaPredicted RBP14.09□□□□□ -0.15
R3HDM1-213ENST00000463230 TMC5Q6UXY8 1006 aa14.09□□□□□ -0.15
R3HDM1-213ENST00000463230 TCEAL8Q8IYN2 117 aa14.09□□□□□ -0.15
R3HDM1-213ENST00000463230 TMEM86AQ8N2M4 240 aa14.09□□□□□ -0.15
R3HDM1-213ENST00000463230 TMC2Q8TDI7 906 aa14.09□□□□□ -0.15
R3HDM1-213ENST00000463230 SMG7Q92540 1137 aaKnown RBP14.09□□□□□ -0.15
R3HDM1-213ENST00000463230 BORCS6Q96GS4 357 aa14.09□□□□□ -0.15
R3HDM1-213ENST00000463230 MTMR12Q9C0I1 747 aa14.09□□□□□ -0.15
R3HDM1-213ENST00000463230 HSFX1Q9UBD0 423 aa14.09□□□□□ -0.15
R3HDM1-213ENST00000463230 FRMD4BQ9Y2L6 1034 aa14.09□□□□□ -0.15
R3HDM1-213ENST00000463230 C2orf16Q68DN1 1984 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 CYB561D2O14569 222 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 SPTLC1O15269 473 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 ITGB3P05106 788 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 C8AP07357 584 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 FAM163BP0C2L3 166 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 ATF2P15336 505 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 POLR2BP30876 1174 aaKnown RBP14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 ELF1P32519 619 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 CLDN10P78369 228 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 GLYCTKQ8IVS8 523 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 THEM5Q8N1Q8 247 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 CSGALNACT2Q8N6G5 542 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 ZNF707Q96C28 371 aaPredicted RBP14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 APOL5Q9BWW9 433 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 POMKQ9H5K3 350 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 AGAP1Q9UPQ3 857 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 EYSQ5T1H1 3165 aa14.08□□□□□ -0.16
R3HDM1-213ENST00000463230 STAU1O95793 577 aaKnown RBP14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 DPH6Q7L8W6 267 aa14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 OTOP3Q7RTS5 596 aa14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 ZDHHC14Q8IZN3 488 aa14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 TOP6BLQ8N6T0 577 aa14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 WDR6Q9NNW5 1121 aaKnown RBP14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 SIX4Q9UIU6 781 aa14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 PCDHA5Q9Y5H7 936 aa14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 WDR27A2RRH5 827 aa14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 MCCD1P59942 119 aaPredicted RBP14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 GPR17Q13304 367 aa14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 ZCWPW2Q504Y3 356 aa14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 FOXR2Q6PJQ5 311 aa14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 TDRD5Q8NAT2 981 aaKnown RBP14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 C2orf15Q8WU43 125 aaKnown RBP14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 MKNK1Q9BUB5 465 aa14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 PIDD1Q9HB75 910 aa14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 CLUHO75153 1309 aa14.07□□□□□ -0.16
R3HDM1-213ENST00000463230 GADD45BO75293 160 aaPredicted RBP14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 SPATA31D3P0C874 917 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 ALADP13716 330 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 TNNI1P19237 187 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 ATICP31939 592 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 BFSP1Q12934 665 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 PLD1Q13393 1074 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 STIM1Q13586 685 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 SPATA31D4Q6ZUB0 917 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 TRAPPC11Q7Z392 1133 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 RDH13Q8NBN7 331 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 OR5B17Q8NGF7 314 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 SLC7A14Q8TBB6 771 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 PARD3BQ8TEW8 1205 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 ACSF2Q96CM8 615 aaPredicted RBP14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 AVENQ9NQS1 362 aaPredicted RBP14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 ZFP37Q9Y6Q3 630 aaPredicted RBP14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 CUL9Q8IWT3 2517 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 IKBKBO14920 756 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 HUS1O60921 280 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 RFPL2O75678 378 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 DLATP10515 647 aaKnown RBP14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 CPB1P15086 417 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 INTS8Q75QN2 995 aaKnown RBP14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 LIMS2Q7Z4I7 341 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 TMEM130Q8N3G9 435 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 IPO9Q96P70 1041 aaKnown RBP14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 TSG101Q99816 390 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 CD320Q9NPF0 282 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 PTPRJQ12913 1337 aa14.06□□□□□ -0.16
R3HDM1-213ENST00000463230 PI4K2BG5E9Z4 385 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 PRRG1O14668 218 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 KRT19P08727 400 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 NR2F2P24468 414 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 CENPPQ6IPU0 288 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 CCDC127Q96BQ5 260 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 HPDLQ96IR7 371 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 RPGRIP1Q96KN7 1286 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 ZCWPW1Q9H0M4 648 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 LRG1P02750 347 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 PSMC2P35998 433 aaKnown RBP14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 LHX1P48742 406 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 LRRC63Q05C16 580 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 WSCD1Q658N2 575 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 ZC3H3Q8IXZ2 948 aaKnown RBP14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 DCP1BQ8IZD4 617 aaKnown RBP14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 TRIML1Q8N9V2 468 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 LEMD2Q8NC56 503 aa14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 SYAP1Q96A49 352 aaPredicted RBP14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 DHTKD1Q96HY7 919 aaPredicted RBP14.05□□□□□ -0.16
R3HDM1-213ENST00000463230 GZF1Q9H116 711 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms