RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 DERAQ9Y315 318 aa16.69■□□□□ 0.26
SKA3-204ENST00000462482 DOCK8Q8NF50 2099 aa16.69■□□□□ 0.26
SKA3-204ENST00000462482 A0A0B4J269 797 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 A0A1W2PRU2 124 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 SDHBP21912 280 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 CCR3P51677 355 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 GUCY2FP51841 1108 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 ZNF131P52739 623 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 LILRA4P59901 499 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 MTAPQ13126 283 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 MCM6Q14566 821 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 ADALQ6DHV7 355 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 JADE1Q6IE81 842 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 CENPPQ6IPU0 288 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 THEM5Q8N1Q8 247 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 DCLK2Q8N568 766 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 ZBTB44Q8NCP5 570 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 SHKBP1Q8TBC3 707 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 RAD54LQ92698 747 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 SENP8Q96LD8 212 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 CHRDQ9H2X0 955 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 ASB7Q9H672 318 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 LMAN1LQ9HAT1 526 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 PRMT8Q9NR22 394 aaPredicted RBP16.68■□□□□ 0.26
SKA3-204ENST00000462482 GMEB2Q9UKD1 530 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 SMG5Q9UPR3 1016 aaKnown RBP16.68■□□□□ 0.26
SKA3-204ENST00000462482 SLC27A5Q9Y2P5 690 aa16.68■□□□□ 0.26
SKA3-204ENST00000462482 TULP1O00294 542 aaPredicted RBP16.67■□□□□ 0.26
SKA3-204ENST00000462482 MOSPD3O75425 235 aa16.67■□□□□ 0.26
SKA3-204ENST00000462482 PLCG1P19174 1290 aa16.67■□□□□ 0.26
SKA3-204ENST00000462482 TUFMP49411 452 aaKnown RBP16.67■□□□□ 0.26
SKA3-204ENST00000462482 MLLT6P55198 1093 aaPredicted RBP16.67■□□□□ 0.26
SKA3-204ENST00000462482 LRRC32Q14392 662 aa16.67■□□□□ 0.26
SKA3-204ENST00000462482 KARSQ15046 597 aaKnown RBP16.67■□□□□ 0.26
SKA3-204ENST00000462482 POTEHQ6S545 545 aa16.67■□□□□ 0.26
SKA3-204ENST00000462482 TSSK4Q6SA08 328 aa16.67■□□□□ 0.26
SKA3-204ENST00000462482 ATAD1Q8NBU5 361 aa16.67■□□□□ 0.26
SKA3-204ENST00000462482 LARP4BQ92615 738 aaKnown RBP16.67■□□□□ 0.26
SKA3-204ENST00000462482 EPC1Q9H2F5 836 aa16.67■□□□□ 0.26
SKA3-204ENST00000462482 ATXN3LQ9H3M9 355 aa16.67■□□□□ 0.26
SKA3-204ENST00000462482 C8orf33Q9H7E9 229 aaPredicted RBP16.67■□□□□ 0.26
SKA3-204ENST00000462482 HSFX1Q9UBD0 423 aa16.67■□□□□ 0.26
SKA3-204ENST00000462482 CCDC39Q9UFE4 941 aa16.67■□□□□ 0.26
SKA3-204ENST00000462482 CPSF3Q9UKF6 684 aaKnown RBP16.67■□□□□ 0.26
SKA3-204ENST00000462482 GVINP1Q7Z2Y8 2422 aa16.67■□□□□ 0.26
SKA3-204ENST00000462482 MTMR11A4FU01 709 aa16.66■□□□□ 0.26
SKA3-204ENST00000462482 CHADO15335 359 aa16.66■□□□□ 0.26
SKA3-204ENST00000462482 ADRB2P07550 413 aa16.66■□□□□ 0.26
SKA3-204ENST00000462482 CCNE1P24864 410 aa16.66■□□□□ 0.26
SKA3-204ENST00000462482 GTF2BQ00403 316 aa16.66■□□□□ 0.26
SKA3-204ENST00000462482 C9orf57Q5W0N0 161 aa16.66■□□□□ 0.26
SKA3-204ENST00000462482 DNAJB7Q7Z6W7 309 aaPredicted RBP16.66■□□□□ 0.26
SKA3-204ENST00000462482 PSMG2Q969U7 264 aa16.66■□□□□ 0.26
SKA3-204ENST00000462482 SEPT5Q99719 369 aaPredicted RBP16.66■□□□□ 0.26
SKA3-204ENST00000462482 AGO2Q9UKV8 859 aaKnown RBP16.66■□□□□ 0.26
SKA3-204ENST00000462482 C2CD2Q9Y426 696 aa16.66■□□□□ 0.26
SKA3-204ENST00000462482 VWA8A3KMH1 1905 aa16.66■□□□□ 0.26
SKA3-204ENST00000462482 CFAP54Q96N23 3096 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 CYB561D2O14569 222 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 FAM189A1O60320 539 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 LILRB5O75023 590 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 NFICP08651 508 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 GABRR2P28476 465 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 NMT1P30419 496 aaKnown RBP16.65■□□□□ 0.26
SKA3-204ENST00000462482 DDIT3P35638 169 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 TXLNAP40222 546 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 CXCL12P48061 93 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 ACOT2P49753 483 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 TAF6P49848 677 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 SMARCB1Q12824 385 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 FZD5Q13467 585 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 POSTNQ15063 836 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 SF3A1Q15459 793 aaKnown RBP16.65■□□□□ 0.26
SKA3-204ENST00000462482 MGAT5BQ3V5L5 792 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 SLC39A12Q504Y0 691 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 ARHGAP29Q52LW3 1261 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 GPR158Q5T848 1215 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 MAMSTRQ6ZN01 415 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 TMC8Q8IU68 726 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 ARID3BQ8IVW6 561 aaPredicted RBP16.65■□□□□ 0.26
SKA3-204ENST00000462482 TMEM130Q8N3G9 435 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 NELL1Q92832 810 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 DNAJC25Q9H1X3 360 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 BLOC1S4Q9NUP1 217 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 THG1LQ9NWX6 298 aaKnown RBP16.65■□□□□ 0.26
SKA3-204ENST00000462482 USP18Q9UMW8 372 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 EXOC7Q9UPT5 735 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 MYO15AQ9UKN7 3530 aa16.65■□□□□ 0.26
SKA3-204ENST00000462482 VPS37CA5D8V6 355 aaPredicted RBP16.64■□□□□ 0.25
SKA3-204ENST00000462482 PRR5-ARHGAP8B1AHC4 643 aa16.64■□□□□ 0.25
SKA3-204ENST00000462482 PIRO00625 290 aa16.64■□□□□ 0.25
SKA3-204ENST00000462482 PPEF2O14830 753 aa16.64■□□□□ 0.25
SKA3-204ENST00000462482 VNN2O95498 520 aa16.64■□□□□ 0.25
SKA3-204ENST00000462482 CYP11A1P05108 521 aa16.64■□□□□ 0.25
SKA3-204ENST00000462482 PDCP20941 246 aa16.64■□□□□ 0.25
SKA3-204ENST00000462482 CDC25CP30307 473 aa16.64■□□□□ 0.25
SKA3-204ENST00000462482 ARHGAP8P85298 464 aa16.64■□□□□ 0.25
SKA3-204ENST00000462482 POU5F1Q01860 360 aaKnown RBP16.64■□□□□ 0.25
SKA3-204ENST00000462482 LMNB2Q03252 620 aa16.64■□□□□ 0.25
SKA3-204ENST00000462482 PTPAQ15257 358 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms