RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 WDR72Q3MJ13 1102 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 VARS2Q5ST30 1063 aaKnown RBP12.67□□□□□ -0.38
CPNE1-221ENST00000462352 PDXDC1Q6P996 788 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 PRSS55Q6UWB4 352 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-221ENST00000462352 ADGRD2Q7Z7M1 963 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 TAF4BQ92750 862 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 SEMA4DQ92854 862 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 ELMO3Q96BJ8 720 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 TUBGCP2Q9BSJ2 902 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 HSD3B7Q9H2F3 369 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 NSUN3Q9H649 340 aaKnown RBP12.67□□□□□ -0.38
CPNE1-221ENST00000462352 VRTNQ9H8Y1 702 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 RXFP1Q9HBX9 757 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 CBX8Q9HC52 389 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 RAB20Q9NX57 234 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 L1RE1Q9UN81 338 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 COQ4Q9Y3A0 265 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 MYO7AQ13402 2215 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 ATG2AQ2TAZ0 1938 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 BECN2A8MW95 431 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 P4HA2O15460 535 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 HUS1O60921 280 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 CLSTN1O94985 981 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 CYP11A1P05108 521 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 PRKCSHP14314 528 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-221ENST00000462352 ZNF18P17022 549 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 ZNF445P59923 1031 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 YWHAHQ04917 246 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-221ENST00000462352 MRPL58Q14197 206 aaKnown RBP12.66□□□□□ -0.38
CPNE1-221ENST00000462352 MAN2A1Q16706 1144 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 SOWAHAQ2M3V2 549 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 TCEAL5Q5H9L2 206 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 ZNF667Q5HYK9 610 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 MIIPQ5JXC2 388 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 WSCD1Q658N2 575 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 SPOPLQ6IQ16 392 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 ANKS3Q6ZW76 656 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 DPH6Q7L8W6 267 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 RBM23Q86U06 439 aaKnown RBP12.66□□□□□ -0.38
CPNE1-221ENST00000462352 MICALL1Q8N3F8 863 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 TOP6BLQ8N6T0 577 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 FAM200AQ8TCP9 573 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 KLHL5Q96PQ7 755 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 PI4K2AQ9BTU6 479 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 IMPG2Q9BZV3 1241 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 TSPY26PQ9H489 355 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.66□□□□□ -0.38
CPNE1-221ENST00000462352 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.66□□□□□ -0.38
CPNE1-221ENST00000462352 FNIP2Q9P278 1114 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 MTRRQ9UBK8 725 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 NXF1Q9UBU9 619 aaKnown RBP12.66□□□□□ -0.38
CPNE1-221ENST00000462352 DSEQ9UL01 958 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 POLIQ9UNA4 740 aa12.66□□□□□ -0.38
CPNE1-221ENST00000462352 PRRC2BQ5JSZ5 2229 aaKnown RBP12.66□□□□□ -0.38
CPNE1-221ENST00000462352 H7C4K7 107 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 TEX28O15482 410 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 OAZ2O95190 189 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 CNPP09543 421 aaKnown RBP12.65□□□□□ -0.38
CPNE1-221ENST00000462352 RPL17P18621 184 aaKnown RBP12.65□□□□□ -0.38
CPNE1-221ENST00000462352 CDK11BP21127 795 aaKnown RBP12.65□□□□□ -0.38
CPNE1-221ENST00000462352 NRIP1P48552 1158 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 TNNC1P63316 161 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 NOP14P78316 857 aaKnown RBP12.65□□□□□ -0.38
CPNE1-221ENST00000462352 CREMQ03060 361 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 CETN1Q12798 172 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 KRT31Q15323 416 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 VWA3BQ502W6 1294 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 OVOS1Q6IE37 1185 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 ZNF280DQ6N043 979 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 RSPO2Q6UXX9 243 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-221ENST00000462352 LIMS2Q7Z4I7 341 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 LUZP1Q86V48 1076 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 METTL23Q86XA0 190 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 TMEM86AQ8N2M4 240 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 PDCL2Q8N4E4 241 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 CCDC150Q8NCX0 1101 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 PPP2R3CQ969Q6 453 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 MMS19Q96T76 1030 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 CLSTN3Q9BQT9 956 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 EMILIN2Q9BXX0 1053 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 NDST4Q9H3R1 872 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 TLE6Q9H808 572 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 APOBEC3GQ9HC16 384 aaKnown RBP12.65□□□□□ -0.38
CPNE1-221ENST00000462352 TAB2Q9NYJ8 693 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 LIMA1Q9UHB6 759 aaKnown RBP12.65□□□□□ -0.38
CPNE1-221ENST00000462352 BACE2Q9Y5Z0 518 aa12.65□□□□□ -0.38
CPNE1-221ENST00000462352 TSC2P49815 1807 aa12.65□□□□□ -0.39
CPNE1-221ENST00000462352 PER2O15055 1255 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 ADAM12O43184 909 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 TBC1D4O60343 1298 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 CLASP2O75122 1294 aaKnown RBP12.64□□□□□ -0.39
CPNE1-221ENST00000462352 TACC1O75410 805 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 ATP1A3P13637 1013 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 P4HA1P13674 534 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 KLRC2P26717 231 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 GTF2F1P35269 517 aaKnown RBP eCLIP12.64□□□□□ -0.39
CPNE1-221ENST00000462352 ASPAP45381 313 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 NDUFV1P49821 464 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 HYAL1Q12794 435 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 DUSP6Q16828 381 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms