RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 XPAP23025 273 aaPredicted RBP5.94□□□□□ -1.46
COPS3-204ENST00000462236 MTNR1BP49286 362 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 SLC5A3P53794 718 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 SPIDRQ14159 915 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 PITRM1Q5JRX3 1037 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 GJC2Q5T442 439 aaPredicted RBP5.94□□□□□ -1.46
COPS3-204ENST00000462236 TCERG1LQ5VWI1 586 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 CCDC62Q6P9F0 684 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 UNQ6494/PRO21346Q6UXR6 183 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 Q6ZUG5 572 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 KCNK18Q7Z418 384 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 ZNF804AQ7Z570 1209 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 FAM83AQ86UY5 434 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 ZBTB46Q86UZ6 589 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 SLC41A1Q8IVJ1 513 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 KLHL36Q8N4N3 616 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 PPP1R14CQ8TAE6 165 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 ZKSCAN4Q969J2 545 aaPredicted RBP5.94□□□□□ -1.46
COPS3-204ENST00000462236 TOX2Q96NM4 488 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 MRIQ9BWK5 157 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 KATNBL1Q9H079 304 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 TMEM168Q9H0V1 697 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 TCF7L1Q9HCS4 588 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 CCM2LQ9NUG4 571 aaPredicted RBP5.94□□□□□ -1.46
COPS3-204ENST00000462236 PRSS50Q9UI38 385 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 MAP3K2Q9Y2U5 619 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 PCDHB6Q9Y5E3 794 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 FOCADQ5VW36 1801 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 PFASO15067 1338 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 TNKSO95271 1327 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 CHD7Q9P2D1 2997 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 ATRNL1Q5VV63 1379 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 PI4KAP2A4QPH2 592 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 KLHL33A6NCF5 533 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 DDX3XO00571 662 aaKnown RBP eCLIP5.93□□□□□ -1.462e-11■■■■■ 27.9
COPS3-204ENST00000462236 MYBL2P10244 700 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 FLT3LGP49771 235 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 NRG3P56975 720 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 MCL1Q07820 350 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 CT83Q5H943 113 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 MFSD14BQ5SR56 506 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 TMEM240Q5SV17 173 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 TRIM68Q6AZZ1 485 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 PGM2L1Q6PCE3 622 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 OTOP2Q7RTS6 562 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 UBE3BQ7Z3V4 1068 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 PI4KAP1Q8N8J0 262 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.93□□□□□ -1.46
COPS3-204ENST00000462236 AUTS2Q8WXX7 1259 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 LPPQ93052 612 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 GFM2Q969S9 779 aaKnown RBP5.93□□□□□ -1.46
COPS3-204ENST00000462236 EAF2Q96CJ1 260 aaPredicted RBP5.93□□□□□ -1.46
COPS3-204ENST00000462236 FAM84BQ96KN1 310 aaPredicted RBP5.93□□□□□ -1.46
COPS3-204ENST00000462236 DEFB118Q96PH6 123 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 MPHOSPH8Q99549 860 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 NOL10Q9BSC4 688 aaKnown RBP5.93□□□□□ -1.46
COPS3-204ENST00000462236 BARX1Q9HBU1 254 aaPredicted RBP5.93□□□□□ -1.46
COPS3-204ENST00000462236 POLR3BQ9NW08 1133 aaPredicted RBP5.93□□□□□ -1.46
COPS3-204ENST00000462236 DNAJC28Q9NX36 388 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 MKS1Q9NXB0 559 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 ZMYND8Q9ULU4 1186 aaPredicted RBP5.93□□□□□ -1.46
COPS3-204ENST00000462236 MYO5AQ9Y4I1 1855 aaKnown RBP5.93□□□□□ -1.46
COPS3-204ENST00000462236 ZNF318Q5VUA4 2279 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 ZDBF2Q9HCK1 2354 aa5.93□□□□□ -1.46
COPS3-204ENST00000462236 CHD9Q3L8U1 2897 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 CXCL11O14625 94 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 NUAK1O60285 661 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 PCDH8O95206 1070 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 DDX58O95786 925 aaKnown RBP5.92□□□□□ -1.46
COPS3-204ENST00000462236 TFRCP02786 760 aaKnown RBP5.92□□□□□ -1.46
COPS3-204ENST00000462236 VCAM1P19320 739 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 AGXTP21549 392 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 CCND1P24385 295 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 RECQLP46063 649 aaPredicted RBP5.92□□□□□ -1.46
COPS3-204ENST00000462236 RBM5P52756 815 aaKnown RBP eCLIP5.92□□□□□ -1.46
COPS3-204ENST00000462236 GCKRQ14397 625 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 PTPN21Q16825 1174 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 ABCB5Q2M3G0 1257 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 MUM1Q2TAK8 710 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 PHF19Q5T6S3 580 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 APOBEC3HQ6NTF7 200 aaKnown RBP5.92□□□□□ -1.46
COPS3-204ENST00000462236 LYSMD2Q8IV50 215 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 CMIPQ8IY22 773 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 C8orf58Q8NAV2 365 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 ADAMTS17Q8TE56 1095 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 GAB3Q8WWW8 586 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 RUNDC1Q96C34 613 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 DYDC2Q96IM9 177 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 PARK7Q99497 189 aaKnown RBP5.92□□□□□ -1.46
COPS3-204ENST00000462236 PCGF6Q9BYE7 350 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.92□□□□□ -1.46
COPS3-204ENST00000462236 KCTD10Q9H3F6 313 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 ADAM29Q9UKF5 820 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 GJD2Q9UKL4 321 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 OGDHLQ9ULD0 1010 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 JAG2Q9Y219 1238 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 SLC45A1Q9Y2W3 748 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 LAS1LQ9Y4W2 734 aaKnown RBP5.92□□□□□ -1.46
COPS3-204ENST00000462236 GPR45Q9Y5Y3 372 aa5.92□□□□□ -1.46
COPS3-204ENST00000462236 CDY2AQ9Y6F7 541 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms