RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 SPATA32Q96LK8 384 aa7.69□□□□□ -1.18
NUP50-212ENST00000461194 FERD3LQ96RJ6 166 aa7.69□□□□□ -1.18
NUP50-212ENST00000461194 PPP1R16BQ96T49 567 aa7.69□□□□□ -1.18
NUP50-212ENST00000461194 YME1L1Q96TA2 773 aa7.69□□□□□ -1.18
NUP50-212ENST00000461194 EIF2AK1Q9BQI3 630 aaKnown RBP7.69□□□□□ -1.18
NUP50-212ENST00000461194 JPH2Q9BR39 696 aaPredicted RBP7.69□□□□□ -1.18
NUP50-212ENST00000461194 SH2D3AQ9BRG2 576 aa7.69□□□□□ -1.18
NUP50-212ENST00000461194 TMX1Q9H3N1 280 aa7.69□□□□□ -1.18
NUP50-212ENST00000461194 CYP26B1Q9NR63 512 aa7.69□□□□□ -1.18
NUP50-212ENST00000461194 PPT2Q9UMR5 302 aa7.69□□□□□ -1.18
NUP50-212ENST00000461194 ST3GAL5Q9UNP4 418 aa7.69□□□□□ -1.18
NUP50-212ENST00000461194 SMC3Q9UQE7 1217 aa7.69□□□□□ -1.18
NUP50-212ENST00000461194 AKT3Q9Y243 479 aa7.69□□□□□ -1.18
NUP50-212ENST00000461194 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.69□□□□□ -1.18
NUP50-212ENST00000461194 COL6A3P12111 3177 aa7.69□□□□□ -1.18
NUP50-212ENST00000461194 KAT6AQ92794 2004 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 EPOPA6NHQ4 379 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 GSC2O15499 205 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 LRIG2O94898 1065 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 ATE1O95260 518 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 CST3P01034 146 aaPredicted RBP7.68□□□□□ -1.18
NUP50-212ENST00000461194 F13BP05160 661 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 FAM87AP0C7U9 286 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 DARSP14868 501 aaKnown RBP7.68□□□□□ -1.18
NUP50-212ENST00000461194 POU3F3P20264 500 aaPredicted RBP7.68□□□□□ -1.18
NUP50-212ENST00000461194 TECP42680 631 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 DNM2P50570 870 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 TOB1P50616 345 aaPredicted RBP7.68□□□□□ -1.18
NUP50-212ENST00000461194 YARSP54577 528 aaKnown RBP7.68□□□□□ -1.18
NUP50-212ENST00000461194 NPEPPSP55786 919 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 ERVK-21P61565 698 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 CYP4A11Q02928 519 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 SLC6A19Q695T7 634 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 OGFOD3Q6PK18 319 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 SPRED2Q7Z698 418 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 FAM228AQ86W67 206 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 TPH2Q8IWU9 490 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 MRPL41Q8IXM3 137 aaKnown RBP7.68□□□□□ -1.18
NUP50-212ENST00000461194 TOP6BLQ8N6T0 577 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 C4orf32Q8N8J7 132 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 FAM13CQ8NE31 585 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 SHKBP1Q8TBC3 707 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 ARNTL2Q8WYA1 636 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 GATA6Q92908 595 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 ZNF689Q96CS4 500 aaPredicted RBP7.68□□□□□ -1.18
NUP50-212ENST00000461194 PSMG3-AS1Q96PY0 264 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 TGS1Q96RS0 853 aaKnown RBP7.68□□□□□ -1.18
NUP50-212ENST00000461194 DHX33Q9H6R0 707 aaKnown RBP7.68□□□□□ -1.18
NUP50-212ENST00000461194 CERS4Q9HA82 394 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 RC3H2Q9HBD1 1191 aaKnown RBP7.68□□□□□ -1.18
NUP50-212ENST00000461194 RGS18Q9NS28 235 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 C1orf112Q9NSG2 853 aa7.68□□□□□ -1.18
NUP50-212ENST00000461194 SUCLA2Q9P2R7 463 aaPredicted RBP7.68□□□□□ -1.18
NUP50-212ENST00000461194 SLC22A31A6NKX4 558 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 C9IYK1 514 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 H3BQV1 296 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 K7ELQ4 463 aaPredicted RBP7.67□□□□□ -1.18
NUP50-212ENST00000461194 RFXAPO00287 272 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 MGEA5O60502 916 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 DNAJA2O60884 412 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 DGKIO75912 1065 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 STAG3L1P0CL83 205 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 XRCC6P12956 609 aaKnown RBP eCLIP7.67□□□□□ -1.18
NUP50-212ENST00000461194 NASPP49321 788 aaPredicted RBP7.67□□□□□ -1.18
NUP50-212ENST00000461194 SARSP49591 514 aaKnown RBP7.67□□□□□ -1.18
NUP50-212ENST00000461194 RARRES1P49788 294 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 POLGP54098 1239 aaPredicted RBP7.67□□□□□ -1.18
NUP50-212ENST00000461194 COL9A2Q14055 689 aaPredicted RBP7.67□□□□□ -1.18
NUP50-212ENST00000461194 RILPL1Q5EBL4 403 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 XKR9Q5GH70 373 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 LARP1BQ659C4 914 aaKnown RBP7.67□□□□□ -1.18
NUP50-212ENST00000461194 MCTP1Q6DN14 999 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 CCDC81Q6ZN84 652 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 SLC24A5Q71RS6 500 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 ZNF410Q86VK4 478 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 CATSPER3Q86XQ3 398 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 RHPN2Q8IUC4 686 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 CPLX3Q8WVH0 158 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 ZNF668Q96K58 619 aaPredicted RBP7.67□□□□□ -1.18
NUP50-212ENST00000461194 SCLT1Q96NL6 688 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 SAMD11Q96NU1 681 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 ADAM2Q99965 735 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 POLR3CQ9BUI4 534 aaPredicted RBP7.67□□□□□ -1.18
NUP50-212ENST00000461194 DUSP23Q9BVJ7 150 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 GCOM2Q9BZD3 368 aaPredicted RBP7.67□□□□□ -1.18
NUP50-212ENST00000461194 TUFT1Q9NNX1 390 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 ANKEF1Q9NU02 776 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 PCDHB6Q9Y5E3 794 aa7.67□□□□□ -1.18
NUP50-212ENST00000461194 CHD9Q3L8U1 2897 aa7.66□□□□□ -1.18
NUP50-212ENST00000461194 A0A087WZ62 844 aa7.66□□□□□ -1.18
NUP50-212ENST00000461194 DENND3A2RUS2 1198 aa7.66□□□□□ -1.18
NUP50-212ENST00000461194 LAD1O00515 517 aa7.66□□□□□ -1.18
NUP50-212ENST00000461194 ASAP2O43150 1006 aa7.66□□□□□ -1.18
NUP50-212ENST00000461194 LPXNO60711 386 aa7.66□□□□□ -1.18
NUP50-212ENST00000461194 MED24O75448 989 aa7.66□□□□□ -1.18
NUP50-212ENST00000461194 LINC00271P0C7V0 271 aa7.66□□□□□ -1.18
NUP50-212ENST00000461194 ZSCAN20P17040 1043 aaPredicted RBP7.66□□□□□ -1.18
NUP50-212ENST00000461194 MUTP22033 750 aa7.66□□□□□ -1.18
NUP50-212ENST00000461194 RPA1P27694 616 aa7.66□□□□□ -1.18
NUP50-212ENST00000461194 SOX9P48436 509 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms