RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 PCDHGA9Q9Y5G4 932 aaKnown RBP4.53□□□□□ -1.68
SPTLC1-203ENST00000461132 PCDHGA8Q9Y5G5 932 aa4.53□□□□□ -1.68
SPTLC1-203ENST00000461132 PCDHGA7Q9Y5G6 932 aa4.53□□□□□ -1.68
SPTLC1-203ENST00000461132 PCDHGA6Q9Y5G7 932 aa4.53□□□□□ -1.68
SPTLC1-203ENST00000461132 PCDHGA3Q9Y5H0 932 aa4.53□□□□□ -1.68
SPTLC1-203ENST00000461132 MGST3O14880 152 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 AKAP10O43572 662 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 GPR32O75388 356 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 LDHAP00338 332 aaKnown RBP4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 NBPF7P0C2Y1 421 aaPredicted RBP4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 GPD1P21695 349 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 KRT85P78386 507 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 C4orf46Q504U0 113 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 KIAA1614Q5VZ46 1190 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 NXNQ6DKJ4 435 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 OTUD7BQ6GQQ9 843 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 KSR2Q6VAB6 950 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 PTF1AQ7RTS3 328 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 UBE3BQ7Z3V4 1068 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 MIER2Q8N344 545 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 OR2I1PQ8NGU4 316 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 CASKIN2Q8WXE0 1202 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 FUBP1Q96AE4 644 aaKnown RBP4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 SLC13A1Q9BZW2 595 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 ZNF700Q9H0M5 742 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 CDH19Q9H159 772 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 UNKLQ9H9P5 680 aaKnown RBP4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 CPNE5Q9HCH3 593 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 TDP1Q9NUW8 608 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 FOXJ2Q9P0K8 574 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 TUBD1Q9UJT1 453 aa4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 RUVBL1Q9Y265 456 aaKnown RBP4.52□□□□□ -1.69
SPTLC1-203ENST00000461132 MYBBP1AQ9BQG0 1328 aaKnown RBP4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 DNAJC9-AS1A6NH13 148 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 LRRC3CA6NJW4 275 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 RPLP2P05387 115 aaKnown RBP4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 IFIT2P09913 472 aaKnown RBP4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 ITGB6P18564 788 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 DDCP20711 480 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 SLC6A2P23975 617 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 GUCY1A2P33402 732 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 FOLR3P41439 243 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 RECQLP46063 649 aaPredicted RBP4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 SLC6A9P48067 706 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 FOXF2Q12947 444 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 MLC1Q15049 377 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 SYCP2LQ5T4T6 812 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 FAM102BQ5T8I3 360 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 KAZNQ674X7 775 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 PPP4R3AQ6IN85 833 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 TCEAL8Q8IYN2 117 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 LNX2Q8N448 690 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 SSH3Q8TE77 659 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 NUP133Q8WUM0 1156 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 HOOK2Q96ED9 719 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 NAP1L4Q99733 375 aaKnown RBP4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 IL17RBQ9NRM6 502 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 FAM30AQ9NZY2 134 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 SIK3Q9Y2K2 1263 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 LUC7L2Q9Y383 392 aaKnown RBP4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 PCDHA13Q9Y5I0 950 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 ACTL7AQ9Y615 435 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 ATRNL1Q5VV63 1379 aa4.51□□□□□ -1.69
SPTLC1-203ENST00000461132 FZD9O00144 591 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 YY2O15391 372 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 IL33O95760 270 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 FPR1P21462 350 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 WASP42768 502 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 ZNF81P51508 661 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 ODF1Q14990 250 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 LRRC41Q15345 812 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 GEN1Q17RS7 908 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 FAM153CQ494X1 144 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 PREPLQ4J6C6 727 aaPredicted RBP4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 CXorf57Q6NSI4 855 aaKnown RBP4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 TMED8Q6PL24 325 aaPredicted RBP4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 C14orf80Q86SX3 495 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 TTC8Q8TAM2 541 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 TBC1D15Q8TC07 691 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 PNISRQ8TF01 805 aaKnown RBP4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 FBXO41Q8TF61 875 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 SCARB1Q8WTV0 552 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 RAB24Q969Q5 203 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 NACC2Q96BF6 587 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 MARS2Q96GW9 593 aaKnown RBP4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 FBXL20Q96IG2 436 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 TMX3Q96JJ7 454 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 PRDM11Q9NQV5 511 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 FBXO34Q9NWN3 711 aa4.5□□□□□ -1.69
SPTLC1-203ENST00000461132 CDHR4A6H8M9 788 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 CCDC154A6NI56 674 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 KRTAP29-1A8MX34 341 aaPredicted RBP4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 PROB1E7EW31 1015 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 KIAA0391O15091 583 aaKnown RBP4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 NPHP1O15259 732 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 HTRA2O43464 458 aaPredicted RBP4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 RFPL1O75677 317 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 PCSK1P29120 753 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 CTGFP29279 349 aa4.49□□□□□ -1.69
SPTLC1-203ENST00000461132 ADKP55263 362 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms