RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 MGAT3Q09327 533 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 DRP2Q13474 957 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 KNOP1Q1ED39 458 aaKnown RBP6.48□□□□□ -1.37
NUP98-208ENST00000461047 DCAF4L1Q3SXM0 396 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 ATF7IP2Q5U623 682 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 CDCA2Q69YH5 1023 aaPredicted RBP6.48□□□□□ -1.37
NUP98-208ENST00000461047 TWF2Q6IBS0 349 aaKnown RBP6.48□□□□□ -1.37
NUP98-208ENST00000461047 CNKSR3Q6P9H4 555 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 DEFB128Q7Z7B8 93 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 GJD3Q8N144 294 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 GUF1Q8N442 669 aaKnown RBP6.48□□□□□ -1.37
NUP98-208ENST00000461047 TMEM161BQ8NDZ6 487 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 SPATA20Q8TB22 786 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 ZNF507Q8TCN5 953 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 RSPH1Q8WYR4 309 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 DHX38Q92620 1227 aaKnown RBP6.48□□□□□ -1.37
NUP98-208ENST00000461047 KCNN1Q92952 543 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 ZBTB10Q96DT7 871 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 MYRFLQ96LU7 910 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 GBP3Q9H0R5 595 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 KCNF1Q9H3M0 494 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 FZD8Q9H461 694 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 IL23AQ9NPF7 189 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 UBN1Q9NPG3 1134 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 ARHGAP28Q9P2N2 729 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 PADI3Q9ULW8 664 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 PIN4Q9Y237 131 aaKnown RBP6.48□□□□□ -1.37
NUP98-208ENST00000461047 TNFSF13BQ9Y275 285 aa6.48□□□□□ -1.37
NUP98-208ENST00000461047 NOC2LQ9Y3T9 749 aaKnown RBP6.48□□□□□ -1.37
NUP98-208ENST00000461047 A0A1B0GUA9 196 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 TRIM43BA6NCK2 446 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 SMTNL1A8MU46 457 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 NDUFB5O43674 189 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 KLRC4O43908 158 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 ICMTO60725 284 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 PRPF6O94906 941 aaKnown RBP6.47□□□□□ -1.37
NUP98-208ENST00000461047 EOMESO95936 686 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 CXCL10P02778 98 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 TPM2P07951 284 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 MCF2P10911 925 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 ERCC5P28715 1186 aaPredicted RBP6.47□□□□□ -1.37
NUP98-208ENST00000461047 CASP1P29466 404 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 CD52P31358 61 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 RGS19P49795 217 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 LRRC63Q05C16 580 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 STK4Q13043 487 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 MORC3Q14149 939 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 MYBPC2Q14324 1141 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 LPIN1Q14693 890 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 SURF1Q15526 300 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 STX1AQ16623 288 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 ZC2HC1CQ53FD0 456 aaPredicted RBP6.47□□□□□ -1.37
NUP98-208ENST00000461047 COBLL1Q53SF7 1204 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 PLEKHG4Q58EX7 1191 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 ISM2Q6H9L7 571 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 SLC27A1Q6PCB7 646 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 SLC24A5Q71RS6 500 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 ABI1Q8IZP0 508 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 ARMC10Q8N2F6 343 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 ANKRD20A12PQ8NF67 263 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 DBF4BQ8NFT6 615 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 LRRC15Q8TF66 581 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 POMGNT1Q8WZA1 660 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 BADQ92934 168 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 TRIM43Q96BQ3 446 aaPredicted RBP6.47□□□□□ -1.37
NUP98-208ENST00000461047 SCLYQ96I15 445 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 FAM46AQ96IP4 442 aaKnown RBP6.47□□□□□ -1.37
NUP98-208ENST00000461047 ZNF668Q96K58 619 aaPredicted RBP6.47□□□□□ -1.37
NUP98-208ENST00000461047 CTAGE1Q96RT6 745 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 TSPAN18Q96SJ8 248 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 ADAM2Q99965 735 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 CCDC94Q9BW85 323 aaPredicted RBP6.47□□□□□ -1.37
NUP98-208ENST00000461047 TARS2Q9BW92 718 aaKnown RBP6.47□□□□□ -1.37
NUP98-208ENST00000461047 ERVK-5Q9HDB9 667 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 RGS18Q9NS28 235 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 TOPORSQ9NS56 1045 aaPredicted RBP6.47□□□□□ -1.37
NUP98-208ENST00000461047 AGPAT5Q9NUQ2 364 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 MAN1B1Q9UKM7 699 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 ZMYND8Q9ULU4 1186 aaPredicted RBP6.47□□□□□ -1.37
NUP98-208ENST00000461047 FRMD4BQ9Y2L6 1034 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 R3HCC1Q9Y3T6 440 aaKnown RBP6.47□□□□□ -1.37
NUP98-208ENST00000461047 PCDHB7Q9Y5E2 793 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 CNTNAP2Q9UHC6 1331 aa6.47□□□□□ -1.37
NUP98-208ENST00000461047 BECN2A8MW95 431 aa6.46□□□□□ -1.38
NUP98-208ENST00000461047 CETN3O15182 167 aa6.46□□□□□ -1.38
NUP98-208ENST00000461047 STX10O60499 249 aa6.46□□□□□ -1.38
NUP98-208ENST00000461047 TSPAN1O60635 241 aa6.46□□□□□ -1.38
NUP98-208ENST00000461047 EXOC3O60645 756 aa6.46□□□□□ -1.38
NUP98-208ENST00000461047 CSDE1O75534 798 aaKnown RBP6.46□□□□□ -1.38
NUP98-208ENST00000461047 GNA14O95837 355 aa6.46□□□□□ -1.38
NUP98-208ENST00000461047 PIGRP01833 764 aa6.46□□□□□ -1.38
NUP98-208ENST00000461047 CLTAP09496 248 aa6.46□□□□□ -1.38
NUP98-208ENST00000461047 MYBP10242 640 aa6.46□□□□□ -1.38
NUP98-208ENST00000461047 ITGA4P13612 1032 aa6.46□□□□□ -1.38
NUP98-208ENST00000461047 KRT13P13646 458 aa6.46□□□□□ -1.38
NUP98-208ENST00000461047 CSF2RAP15509 400 aa6.46□□□□□ -1.38
NUP98-208ENST00000461047 SYN1P17600 705 aa6.46□□□□□ -1.38
NUP98-208ENST00000461047 ARF4P18085 180 aaPredicted RBP6.46□□□□□ -1.38
NUP98-208ENST00000461047 GARTP22102 1010 aa6.46□□□□□ -1.38
NUP98-208ENST00000461047 SSTR4P31391 388 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms