RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 APTXQ7Z2E3 356 aaKnown RBP8.15□□□□□ -1.1
ABCA4-202ENST00000460514 TMCO2Q7Z6W1 182 aaPredicted RBP8.15□□□□□ -1.1
ABCA4-202ENST00000460514 ZNF280BQ86YH2 543 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 FMNL3Q8IVF7 1028 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 EHBP1Q8NDI1 1231 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 NEK11Q8NG66 645 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 SPATA18Q8TC71 538 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 TAS1R2Q8TE23 839 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 CLP1Q92989 425 aaKnown RBP8.15□□□□□ -1.1
ABCA4-202ENST00000460514 TMEM169Q96HH4 297 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 NUP58Q9BVL2 599 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 PLVAPQ9BX97 442 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 XPO4Q9C0E2 1151 aaKnown RBP8.15□□□□□ -1.1
ABCA4-202ENST00000460514 INTS2Q9H0H0 1204 aaKnown RBP8.15□□□□□ -1.1
ABCA4-202ENST00000460514 CXCL16Q9H2A7 254 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 CWH43Q9H720 699 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 GRPEL1Q9HAV7 217 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 GOLGA2P5Q9HBQ8 144 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 SPG21Q9NZD8 308 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 SIX4Q9UIU6 781 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 DSEQ9UL01 958 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 PRG3Q9Y2Y8 225 aaPredicted RBP8.15□□□□□ -1.1
ABCA4-202ENST00000460514 MRPL42Q9Y6G3 142 aaKnown RBP8.15□□□□□ -1.1
ABCA4-202ENST00000460514 CEP290O15078 2479 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 PTPRSQ13332 1948 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 FSD2A1L4K1 749 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 GOLGA6L6A8MZA4 724 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 KPNA7A9QM74 516 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 NRP1O14786 923 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 HUS1O60921 280 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 VNN1O95497 513 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 CST3P01034 146 aaPredicted RBP8.14□□□□□ -1.11
ABCA4-202ENST00000460514 RB1P06400 928 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 FAM163BP0C2L3 166 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 ODC1P11926 461 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 PON1P27169 355 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 SLC11A1P49279 550 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 MFAP3P55082 362 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 LILRA4P59901 499 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 MYL6P60660 151 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 SMAD3P84022 425 aaKnown RBP8.14□□□□□ -1.11
ABCA4-202ENST00000460514 TRIM14Q14142 442 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 SYCP1Q15431 976 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 WDR72Q3MJ13 1102 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 PRPF38BQ5VTL8 546 aaKnown RBP8.14□□□□□ -1.11
ABCA4-202ENST00000460514 PDXDC1Q6P996 788 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 TRIM65Q6PJ69 517 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 DPH6Q7L8W6 267 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 METTL23Q86XA0 190 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 COLGALT1Q8NBJ5 622 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 APPL2Q8NEU8 664 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 JAKMIP2Q96AA8 810 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 MRFAP1L1Q96HT8 127 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 LRCH3Q96II8 777 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 NAP1L5Q96NT1 182 aaPredicted RBP8.14□□□□□ -1.11
ABCA4-202ENST00000460514 TGS1Q96RS0 853 aaKnown RBP8.14□□□□□ -1.11
ABCA4-202ENST00000460514 MMS19Q96T76 1030 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 CRACR2AQ9BSW2 395 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 LSM14BQ9BX40 385 aaKnown RBP8.14□□□□□ -1.11
ABCA4-202ENST00000460514 NIF3L1Q9GZT8 377 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 CYP3A43Q9HB55 503 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 PLCB1Q9NQ66 1216 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 GDAP2Q9NXN4 497 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 APEX2Q9UBZ4 518 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 DNAJB4Q9UDY4 337 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 PUF60Q9UHX1 559 aaKnown RBP8.14□□□□□ -1.11
ABCA4-202ENST00000460514 ADAM28Q9UKQ2 775 aa8.14□□□□□ -1.11
ABCA4-202ENST00000460514 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.14□□□□□ -1.11
ABCA4-202ENST00000460514 ITIH6Q6UXX5 1313 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 LINC01553A4QN01 128 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 FAM181BA6NEQ2 426 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 CYB561D2O14569 222 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 SYN3O14994 580 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 KIF4AO95239 1232 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 CA3P07451 260 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 CTNNB1P35222 781 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 BMPR1AP36894 532 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 AARSP49588 968 aaKnown RBP eCLIP8.13□□□□□ -1.11
ABCA4-202ENST00000460514 ZNF75DP51815 510 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 RABGGTBP53611 331 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 GCNT1Q02742 428 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 UBE3AQ05086 875 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 PPP2R2DQ66LE6 453 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 SPECC1LQ69YQ0 1117 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 FUT10Q6P4F1 479 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 CACNA2D4Q7Z3S7 1137 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.13□□□□□ -1.11
ABCA4-202ENST00000460514 PPFIBP1Q86W92 1011 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 SLC39A11Q8N1S5 342 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 TMEM86AQ8N2M4 240 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 PPM1KQ8N3J5 372 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 TOP6BLQ8N6T0 577 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 ZNF397Q8NF99 534 aaPredicted RBP8.13□□□□□ -1.11
ABCA4-202ENST00000460514 CXorf38Q8TB03 319 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 SEMA4DQ92854 862 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 IGSF21Q96ID5 467 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 SUSD3Q96L08 255 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 SENP8Q96LD8 212 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 PI4K2AQ9BTU6 479 aa8.13□□□□□ -1.11
ABCA4-202ENST00000460514 C11orf84Q9BUA3 381 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms