RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 PTK7Q13308 1070 aa18.5■□□□□ 0.55
CDK11A-209ENST00000460465 RPS6KA1Q15418 735 aa18.5■□□□□ 0.55
CDK11A-209ENST00000460465 NT5DC3Q86UY8 548 aa18.5■□□□□ 0.55
CDK11A-209ENST00000460465 MCOLN2Q8IZK6 566 aa18.5■□□□□ 0.55
CDK11A-209ENST00000460465 GLT1D1Q96MS3 346 aa18.5■□□□□ 0.55
CDK11A-209ENST00000460465 ZSWIM1Q9BR11 485 aa18.5■□□□□ 0.55
CDK11A-209ENST00000460465 OSBPL7Q9BZF2 842 aa18.5■□□□□ 0.55
CDK11A-209ENST00000460465 CYP3A43Q9HB55 503 aa18.5■□□□□ 0.55
CDK11A-209ENST00000460465 ABCB6Q9NP58 842 aa18.5■□□□□ 0.55
CDK11A-209ENST00000460465 UBQLN1Q9UMX0 589 aaKnown RBP18.5■□□□□ 0.55
CDK11A-209ENST00000460465 NOD1Q9Y239 953 aa18.5■□□□□ 0.55
CDK11A-209ENST00000460465 TRIM17Q9Y577 477 aa18.5■□□□□ 0.55
CDK11A-209ENST00000460465 SMIM28A0A1B0GU29 152 aa18.49■□□□□ 0.55
CDK11A-209ENST00000460465 PPEF2O14830 753 aa18.49■□□□□ 0.55
CDK11A-209ENST00000460465 TNNC1P63316 161 aa18.49■□□□□ 0.55
CDK11A-209ENST00000460465 PTPN11Q06124 597 aaPredicted RBP18.49■□□□□ 0.55
CDK11A-209ENST00000460465 XKR4Q5GH76 650 aa18.49■□□□□ 0.55
CDK11A-209ENST00000460465 ARRDC4Q8NCT1 418 aa18.49■□□□□ 0.55
CDK11A-209ENST00000460465 CALR3Q96L12 384 aaKnown RBP18.49■□□□□ 0.55
CDK11A-209ENST00000460465 TSEN34Q9BSV6 310 aaKnown RBP18.49■□□□□ 0.55
CDK11A-209ENST00000460465 NUP85Q9BW27 656 aa18.49■□□□□ 0.55
CDK11A-209ENST00000460465 CNOT8Q9UFF9 292 aaKnown RBP18.49■□□□□ 0.55
CDK11A-209ENST00000460465 MTA2O94776 668 aa18.49■□□□□ 0.55
CDK11A-209ENST00000460465 MYO1EQ12965 1108 aa18.49■□□□□ 0.55
CDK11A-209ENST00000460465 TFAP2BQ92481 460 aa18.49■□□□□ 0.55
CDK11A-209ENST00000460465 AGO3Q9H9G7 860 aaKnown RBP18.49■□□□□ 0.55
CDK11A-209ENST00000460465 HMGXB4Q9UGU5 601 aa18.49■□□□□ 0.55
CDK11A-209ENST00000460465 CILPO75339 1184 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 KCNE1P15382 129 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 RAD23BP54727 409 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 ORC1Q13415 861 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 TRIM71Q2Q1W2 868 aaKnown RBP18.48■□□□□ 0.55
CDK11A-209ENST00000460465 MON1BQ7L1V2 547 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 ZNF564Q8TBZ8 553 aaPredicted RBP18.48■□□□□ 0.55
CDK11A-209ENST00000460465 WHAMMQ8TF30 809 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 CHST12Q9NRB3 414 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 EHD2Q9NZN4 543 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 AMFRQ9UKV5 643 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 A0A1W2PQ45 241 aaPredicted RBP18.48■□□□□ 0.55
CDK11A-209ENST00000460465 A0A1W2PQY0 241 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 GPR182O15218 404 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 TLR3O15455 904 aaKnown RBP18.48■□□□□ 0.55
CDK11A-209ENST00000460465 FBXO47Q5MNV8 452 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 C9orf57Q5W0N0 161 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 RABGGTAQ92696 567 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 TRIM11Q96F44 468 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 TWNKQ96RR1 684 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 EPC1Q9H2F5 836 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 ERVK-5Q9HDB9 667 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 FAM105AQ9NUU6 356 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 SMARCAL1Q9NZC9 954 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 UVRAGQ9P2Y5 699 aa18.48■□□□□ 0.55
CDK11A-209ENST00000460465 DNAH12Q6ZR08 3092 aa18.47■□□□□ 0.55
CDK11A-209ENST00000460465 PAEPP09466 180 aa18.47■□□□□ 0.55
CDK11A-209ENST00000460465 MYBL1P10243 752 aa18.47■□□□□ 0.55
CDK11A-209ENST00000460465 GHRP10912 638 aa18.47■□□□□ 0.55
CDK11A-209ENST00000460465 CD19P15391 556 aa18.47■□□□□ 0.55
CDK11A-209ENST00000460465 C2CD6Q53TS8 623 aa18.47■□□□□ 0.55
CDK11A-209ENST00000460465 CCDC181Q5TID7 509 aa18.47■□□□□ 0.55
CDK11A-209ENST00000460465 C11orf63Q6NUN7 778 aa18.47■□□□□ 0.55
CDK11A-209ENST00000460465 LRRC52Q8N7C0 313 aa18.47■□□□□ 0.55
CDK11A-209ENST00000460465 NOA1Q8NC60 698 aaKnown RBP18.47■□□□□ 0.55
CDK11A-209ENST00000460465 SH3TC2Q8TF17 1288 aa18.47■□□□□ 0.55
CDK11A-209ENST00000460465 MS4A14Q96JA4 679 aa18.47■□□□□ 0.55
CDK11A-209ENST00000460465 TSPAN18Q96SJ8 248 aa18.47■□□□□ 0.55
CDK11A-209ENST00000460465 C11orf70Q9BRQ4 267 aa18.47■□□□□ 0.55
CDK11A-209ENST00000460465 ELOVL4Q9GZR5 314 aa18.47■□□□□ 0.55
CDK11A-209ENST00000460465 TMEM110-MUSTN1A8MSY1 372 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 KCNK3O14649 394 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 RRM1P23921 792 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 CD52P31358 61 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 PHF13Q86YI8 300 aaPredicted RBP18.46■□□□□ 0.55
CDK11A-209ENST00000460465 SLC4A11Q8NBS3 891 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 HES6Q96HZ4 224 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 AVENQ9NQS1 362 aaPredicted RBP18.46■□□□□ 0.55
CDK11A-209ENST00000460465 PADI3Q9ULW8 664 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 PCDHGC3Q9UN70 934 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 XPOTO43592 962 aaKnown RBP18.46■□□□□ 0.55
CDK11A-209ENST00000460465 CD4P01730 458 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 ZSCAN20P17040 1043 aaPredicted RBP18.46■□□□□ 0.55
CDK11A-209ENST00000460465 RBM10P98175 930 aaKnown RBP18.46■□□□□ 0.55
CDK11A-209ENST00000460465 INCA1Q0VD86 236 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 PAK2Q13177 524 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 MESDQ14696 234 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 PHLDB2Q86SQ0 1253 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 TMEM176AQ96HP8 235 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 BTBD6Q96KE9 485 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 RPGRIP1Q96KN7 1286 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.46■□□□□ 0.55
CDK11A-209ENST00000460465 ADAM22Q9P0K1 906 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 SNX9Q9Y5X1 595 aa18.46■□□□□ 0.55
CDK11A-209ENST00000460465 MEIS3P2A8K0S8 358 aa18.45■□□□□ 0.54
CDK11A-209ENST00000460465 LSM8O95777 96 aaKnown RBP18.45■□□□□ 0.54
CDK11A-209ENST00000460465 PAFAH1B1P43034 410 aa18.45■□□□□ 0.54
CDK11A-209ENST00000460465 SOX4Q06945 474 aaPredicted RBP18.45■□□□□ 0.54
CDK11A-209ENST00000460465 C2orf54Q08AI8 447 aa18.45■□□□□ 0.54
CDK11A-209ENST00000460465 LPIN1Q14693 890 aa18.45■□□□□ 0.54
CDK11A-209ENST00000460465 FAM26DQ5JW98 314 aa18.45■□□□□ 0.54
CDK11A-209ENST00000460465 PPP1R2P3Q6NXS1 205 aa18.45■□□□□ 0.54
CDK11A-209ENST00000460465 LLGL2Q6P1M3 1020 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms