RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SLFN11Q7Z7L1 901 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 ERICH1Q86X53 443 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 KCNV2Q8TDN2 545 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 ZNF516Q92618 1163 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 MRPL4Q9BYD3 311 aaKnown RBP16.31■□□□□ 0.2
LMNB1-203ENST00000460265 TMBIM4Q9HC24 238 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 PCNTO95613 3336 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 RTN3O95197 1032 aaPredicted RBP16.31■□□□□ 0.2
LMNB1-203ENST00000460265 HSPA9P38646 679 aaKnown RBP16.31■□□□□ 0.2
LMNB1-203ENST00000460265 GPC3P51654 580 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 HIRAP54198 1017 aaPredicted RBP16.31■□□□□ 0.2
LMNB1-203ENST00000460265 PPP2R2AP63151 447 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 LONRF1Q17RB8 773 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 SMTNL2Q2TAL5 461 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 SYCP2LQ5T4T6 812 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 SCYL2Q6P3W7 929 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 TMC3Q7Z5M5 1100 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 C1orf131Q8NDD1 294 aaKnown RBP16.31■□□□□ 0.2
LMNB1-203ENST00000460265 B4GALNT2Q8NHY0 566 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 PWWP2AQ96N64 755 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 FAM49AQ9H0Q0 323 aaPredicted RBP16.31■□□□□ 0.2
LMNB1-203ENST00000460265 CHST7Q9NS84 486 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 ZFATQ9P243 1243 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 PARP2Q9UGN5 583 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.31■□□□□ 0.2
LMNB1-203ENST00000460265 SRRM3A6NNA2 597 aaPredicted RBP16.3■□□□□ 0.2
LMNB1-203ENST00000460265 LUC7L3O95232 432 aaKnown RBP16.3■□□□□ 0.2
LMNB1-203ENST00000460265 SHBGP04278 402 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 HSPA6P17066 643 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 DHX34Q14147 1143 aaKnown RBP16.3■□□□□ 0.2
LMNB1-203ENST00000460265 DUOXA2Q1HG44 320 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 ZNF572Q7Z3I7 529 aaPredicted RBP16.3■□□□□ 0.2
LMNB1-203ENST00000460265 C9orf72Q96LT7 481 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 MCEEQ96PE7 176 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 COL11A2P13942 1736 aaPredicted RBP16.3■□□□□ 0.2
LMNB1-203ENST00000460265 DCDC2CA8MYV0 355 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 POC1B-GALNT4F8VUJ3 575 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 CST3P01034 146 aaPredicted RBP16.3■□□□□ 0.2
LMNB1-203ENST00000460265 CLUL1Q15846 466 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 UAP1Q16222 522 aaPredicted RBP16.3■□□□□ 0.2
LMNB1-203ENST00000460265 KYNUQ16719 465 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 CLEC16AQ2KHT3 1053 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 TRIM74Q86UV6 250 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 TRIM73Q86UV7 250 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 MCOLN2Q8IZK6 566 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 CHST13Q8NET6 341 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 ZBED3Q96IU2 234 aaPredicted RBP16.3■□□□□ 0.2
LMNB1-203ENST00000460265 NOCTQ9UK39 431 aaKnown RBP16.3■□□□□ 0.2
LMNB1-203ENST00000460265 STXBP5LQ9Y2K9 1186 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 NUB1Q9Y5A7 615 aa16.3■□□□□ 0.2
LMNB1-203ENST00000460265 FAM187AA6NFU0 413 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 FESP07332 822 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 GHRP10912 638 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 SEPT7Q16181 437 aaKnown RBP16.29■□□□□ 0.2
LMNB1-203ENST00000460265 CDO1Q16878 200 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 EFCAB12Q6NXP0 572 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 KLHL23Q8NBE8 558 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 MMP19Q99542 508 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 USP2O75604 605 aaPredicted RBP16.29■□□□□ 0.2
LMNB1-203ENST00000460265 PCK1P35558 622 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 NAMPTP43490 491 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 RAP1GAPP47736 663 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 CDH8P55286 799 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 WNT7BP56706 349 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 SNRPFP62306 86 aaKnown RBP16.29■□□□□ 0.2
LMNB1-203ENST00000460265 FAM182AQ5T1J6 154 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 DPY19L2Q6NUT2 758 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 CD302Q8IX05 232 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 DRAXINQ8NBI3 349 aaPredicted RBP16.29■□□□□ 0.2
LMNB1-203ENST00000460265 NLRP7Q8WX94 980 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 ANKRD36BP1Q96IX9 119 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 PORCNQ9H237 461 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 VPS37BQ9H9H4 285 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 INTS9Q9NV88 658 aaKnown RBP16.29■□□□□ 0.2
LMNB1-203ENST00000460265 SGK1O00141 431 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 CYP2C8P10632 490 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 ATP4AP20648 1035 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 KCNT1Q5JUK3 1230 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 ENOSF1Q7L5Y1 443 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 MFN1Q8IWA4 741 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 SAMD3Q8N6K7 520 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 EPS8L3Q8TE67 593 aaKnown RBP16.29■□□□□ 0.2
LMNB1-203ENST00000460265 PIK3R5Q8WYR1 880 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 EZH1Q92800 747 aaPredicted RBP16.29■□□□□ 0.2
LMNB1-203ENST00000460265 RPS6KC1Q96S38 1066 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 CALN1Q9BXU9 219 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 ASCC2Q9H1I8 757 aaPredicted RBP16.29■□□□□ 0.2
LMNB1-203ENST00000460265 RPF1Q9H9Y2 349 aaKnown RBP16.29■□□□□ 0.2
LMNB1-203ENST00000460265 GINM1Q9NU53 330 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 SAMD15Q9P1V8 674 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 NCANO14594 1321 aa16.29■□□□□ 0.2
LMNB1-203ENST00000460265 TTLL13PA6NNM8 815 aa16.28■□□□□ 0.2
LMNB1-203ENST00000460265 GRM1Q13255 1194 aa16.28■□□□□ 0.2
LMNB1-203ENST00000460265 CAPSQ13938 189 aa16.28■□□□□ 0.2
LMNB1-203ENST00000460265 CWF19L1Q69YN2 538 aaKnown RBP16.28■□□□□ 0.2
LMNB1-203ENST00000460265 GPAT2Q6NUI2 795 aa16.28■□□□□ 0.2
LMNB1-203ENST00000460265 DPP9Q86TI2 863 aa16.28■□□□□ 0.2
LMNB1-203ENST00000460265 SESTD1Q86VW0 696 aa16.28■□□□□ 0.2
LMNB1-203ENST00000460265 C12orf56Q8IXR9 622 aa16.28■□□□□ 0.2
LMNB1-203ENST00000460265 MFSD14AQ96MC6 490 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms