RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 TBX21Q9UL17 535 aa16.78■□□□□ 0.28
CMTM3-203ENST00000460097 USP15Q9Y4E8 981 aaPredicted RBP16.78■□□□□ 0.28
CMTM3-203ENST00000460097 KAT6AQ92794 2004 aa16.77■□□□□ 0.28
CMTM3-203ENST00000460097 PDXKO00764 312 aa16.77■□□□□ 0.28
CMTM3-203ENST00000460097 KIAA0355O15063 1070 aa16.77■□□□□ 0.28
CMTM3-203ENST00000460097 FGGP02679 453 aa16.77■□□□□ 0.28
CMTM3-203ENST00000460097 RARAP10276 462 aa16.77■□□□□ 0.28
CMTM3-203ENST00000460097 ARID5AQ03989 594 aa16.77■□□□□ 0.28
CMTM3-203ENST00000460097 CCDC15Q0P6D6 951 aa16.77■□□□□ 0.28
CMTM3-203ENST00000460097 MYO1EQ12965 1108 aa16.77■□□□□ 0.28
CMTM3-203ENST00000460097 PTK7Q13308 1070 aa16.77■□□□□ 0.28
CMTM3-203ENST00000460097 MARCH8Q5T0T0 291 aa16.77■□□□□ 0.28
CMTM3-203ENST00000460097 BZW1Q7L1Q6 419 aaKnown RBP16.77■□□□□ 0.28
CMTM3-203ENST00000460097 CATSPER3Q86XQ3 398 aa16.77■□□□□ 0.28
CMTM3-203ENST00000460097 POLR3CQ9BUI4 534 aaPredicted RBP16.77■□□□□ 0.28
CMTM3-203ENST00000460097 NIFKQ9BYG3 293 aaKnown RBP16.77■□□□□ 0.28
CMTM3-203ENST00000460097 TUFT1Q9NNX1 390 aa16.77■□□□□ 0.28
CMTM3-203ENST00000460097 WRAP73Q9P2S5 460 aaPredicted RBP16.77■□□□□ 0.28
CMTM3-203ENST00000460097 ZMYND8Q9ULU4 1186 aaPredicted RBP16.77■□□□□ 0.28
CMTM3-203ENST00000460097 MIF4GDA9UHW6 222 aaKnown RBP16.77■□□□□ 0.27
CMTM3-203ENST00000460097 E7ENQ6 273 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 DDX3XO00571 662 aaKnown RBP eCLIP16.77■□□□□ 0.272e-10■■■□□ 18.2
CMTM3-203ENST00000460097 CALUO43852 315 aaPredicted RBP16.77■□□□□ 0.27
CMTM3-203ENST00000460097 SUN1O94901 812 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 STBD1O95210 358 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 GJB6O95452 261 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 RARGP13631 454 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 RAG1P15918 1043 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 SYN1P17600 705 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 RPA1P27694 616 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 CNGA2Q16280 664 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 NFIL3Q16649 462 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 EPM2AIP1Q7L775 607 aaPredicted RBP16.77■□□□□ 0.27
CMTM3-203ENST00000460097 SERINC5Q86VE9 423 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 KCTD17Q8N5Z5 321 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 TEX9Q8N6V9 391 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 TRAPPC12Q8WVT3 735 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 RNF25Q96BH1 459 aaPredicted RBP16.77■□□□□ 0.27
CMTM3-203ENST00000460097 HIPK3Q9H422 1215 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 SIX2Q9NPC8 291 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 SEPT9Q9UHD8 586 aaPredicted RBP16.77■□□□□ 0.27
CMTM3-203ENST00000460097 COL1A2P08123 1366 aa16.77■□□□□ 0.27
CMTM3-203ENST00000460097 MBLAC1A4D2B0 266 aaPredicted RBP16.76■□□□□ 0.27
CMTM3-203ENST00000460097 PHF2O75151 1096 aa16.76■□□□□ 0.27
CMTM3-203ENST00000460097 MED24O75448 989 aa16.76■□□□□ 0.27
CMTM3-203ENST00000460097 LYPLA2O95372 231 aa16.76■□□□□ 0.27
CMTM3-203ENST00000460097 SPATA31C1P0DKV0 1188 aa16.76■□□□□ 0.27
CMTM3-203ENST00000460097 STAT1P42224 750 aa16.76■□□□□ 0.27
CMTM3-203ENST00000460097 PPP2R5AQ15172 486 aa16.76■□□□□ 0.27
CMTM3-203ENST00000460097 ANO5Q75V66 913 aa16.76■□□□□ 0.27
CMTM3-203ENST00000460097 ASRGL1Q7L266 308 aa16.76■□□□□ 0.27
CMTM3-203ENST00000460097 OTUD6AQ7L8S5 288 aa16.76■□□□□ 0.27
CMTM3-203ENST00000460097 JAMLQ86YT9 394 aa16.76■□□□□ 0.27
CMTM3-203ENST00000460097 AGAP11Q8TF27 550 aa16.76■□□□□ 0.27
CMTM3-203ENST00000460097 SYT11Q9BT88 431 aa16.76■□□□□ 0.27
CMTM3-203ENST00000460097 CELF4Q9BZC1 486 aaKnown RBP16.76■□□□□ 0.27
CMTM3-203ENST00000460097 DPH5Q9H2P9 285 aa16.76■□□□□ 0.27
CMTM3-203ENST00000460097 WDR81Q562E7 1941 aa16.76■□□□□ 0.27
CMTM3-203ENST00000460097 ZBTB42B2RXF5 422 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 SMNDC1O75940 238 aaKnown RBP eCLIP16.75■□□□□ 0.27
CMTM3-203ENST00000460097 TIMP1P01033 207 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 SHBGP04278 402 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 CLTAP09496 248 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 PLA2G4BP0C869 781 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 NR2F2P24468 414 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 RPL13P26373 211 aaKnown RBP16.75■□□□□ 0.27
CMTM3-203ENST00000460097 ATP5DP30049 168 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 YWHABP31946 246 aaKnown RBP16.75■□□□□ 0.27
CMTM3-203ENST00000460097 PTGIRP43119 386 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 COPS2P61201 443 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 BFSP2Q13515 415 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 ECM1Q16610 540 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 ZNF568Q3ZCX4 644 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 TAF2Q6P1X5 1199 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 MTHFD1LQ6UB35 978 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 TRMT10CQ7L0Y3 403 aaKnown RBP16.75■□□□□ 0.27
CMTM3-203ENST00000460097 GPIHBP1Q8IV16 184 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 OLIG1Q8TAK6 271 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 ELAC2Q9BQ52 826 aaKnown RBP16.75■□□□□ 0.27
CMTM3-203ENST00000460097 SELENOSQ9BQE4 189 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 PPP1R12CQ9BZL4 782 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 GRHL1Q9NZI5 618 aa16.75■□□□□ 0.27
CMTM3-203ENST00000460097 TRIP12Q14669 1992 aaPredicted RBP16.74■□□□□ 0.27
CMTM3-203ENST00000460097 ATP2C2O75185 946 aa16.74■□□□□ 0.27
CMTM3-203ENST00000460097 CCNB1P14635 433 aa16.74■□□□□ 0.27
CMTM3-203ENST00000460097 CYP11B2P19099 503 aa16.74■□□□□ 0.27
CMTM3-203ENST00000460097 SLC9A1P19634 815 aa16.74■□□□□ 0.27
CMTM3-203ENST00000460097 MUTP22033 750 aa16.74■□□□□ 0.27
CMTM3-203ENST00000460097 GALCP54803 685 aa16.74■□□□□ 0.27
CMTM3-203ENST00000460097 BLMHQ13867 455 aa16.74■□□□□ 0.27
CMTM3-203ENST00000460097 TARBP2Q15633 366 aaKnown RBP16.74■□□□□ 0.27
CMTM3-203ENST00000460097 KNOP1Q1ED39 458 aaKnown RBP16.74■□□□□ 0.27
CMTM3-203ENST00000460097 MTERF2Q49AM1 385 aa16.74■□□□□ 0.27
CMTM3-203ENST00000460097 HERC4Q5GLZ8 1057 aaPredicted RBP16.74■□□□□ 0.27
CMTM3-203ENST00000460097 TBC1D1Q86TI0 1168 aaPredicted RBP16.74■□□□□ 0.27
CMTM3-203ENST00000460097 DHX38Q92620 1227 aaKnown RBP16.74■□□□□ 0.27
CMTM3-203ENST00000460097 ZBTB10Q96DT7 871 aa16.74■□□□□ 0.27
CMTM3-203ENST00000460097 FAM212AQ96EL1 285 aa16.74■□□□□ 0.27
CMTM3-203ENST00000460097 TRIM51Q9BSJ1 452 aa16.74■□□□□ 0.27
CMTM3-203ENST00000460097 RXFP1Q9HBX9 757 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms