RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 CCDC103Q8IW40 242 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 RMDN1Q96DB5 314 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 MAP3K14Q99558 947 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 WDR18Q9BV38 432 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 IL25Q9H293 177 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 MBD2Q9UBB5 411 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 CACNA1SQ13698 1873 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 TAF1P21675 1872 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 PRR23AA6NEV1 266 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 B2RBV5 119 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 MEIS1O00470 390 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 PECAM1P16284 738 aaPredicted RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 SLC16A2P36021 539 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 GCLCP48506 637 aaPredicted RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 NAALADL2Q58DX5 795 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 SPDYCQ5MJ68 293 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 TTC33Q6PID6 262 aaPredicted RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 ZNF513Q8N8E2 541 aaPredicted RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 PROCA1Q8NCQ7 364 aaPredicted RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 FAM81AQ8TBF8 368 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 RAPGEF5Q92565 580 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 NACA2Q9H009 215 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 ASNSD1Q9NWL6 643 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 CNOT8Q9UFF9 292 aaKnown RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 DNAJC12Q9UKB3 198 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 CDY2AQ9Y6F7 541 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 CDY1Q9Y6F8 540 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 USP2O75604 605 aaPredicted RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 CFBP00751 764 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 ZBTB48P10074 688 aaPredicted RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 CALB2P22676 271 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 PRELPP51888 382 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 NCAPHQ15003 741 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 Q4G0T1 1027 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 TMC5Q6UXY8 1006 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 GMCL1P1Q8NEA9 526 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 HPS3Q969F9 1004 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 COA7Q96BR5 231 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 KLHL4Q9C0H6 718 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 ADNPQ9H2P0 1102 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 SLC38A10Q9HBR0 1119 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 RABGEF1Q9UJ41 708 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 ARIH1Q9Y4X5 557 aaPredicted RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 PNMA6FA0A0J9YX94 578 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 AREL1O15033 823 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 H2AFYO75367 372 aaKnown RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 LDHAP00338 332 aaKnown RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 PLA2G4BP0C869 781 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 SOX6P35712 828 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 CACNA2D1P54289 1103 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 PDIA2Q13087 525 aaKnown RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 SLFN12LQ6IEE8 588 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 MAEAQ7L5Y9 396 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 DPP9Q86TI2 863 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 GRAMD1CQ8IYS0 662 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 ZBED3Q96IU2 234 aaPredicted RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 CALN1Q9BXU9 219 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 EPC1Q9H2F5 836 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 CYP4F11Q9HBI6 524 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 NSMCE4AQ9NXX6 385 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 UVRAGQ9P2Y5 699 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 HDAC6Q9UBN7 1215 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 ADD3Q9UEY8 706 aaKnown RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 CDV3Q9UKY7 258 aaKnown RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 ZDHHC9Q9Y397 364 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 COMMD3-BMI1R4GMX3 469 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 ESYT3A0FGR9 886 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 SPDYE5A6NIY4 337 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 ASNA1O43681 348 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 SRP72O76094 671 aaKnown RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 ECM2O94769 699 aaPredicted RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 KRT6AP02538 564 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 KRT6BP04259 564 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 GSNP06396 782 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 APOA4P06727 396 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 PSMC3P17980 439 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 TMOD1P28289 359 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 KRT6CP48668 564 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 CLK1P49759 484 aaKnown RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 EXOSC10Q01780 885 aaKnown RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 GFPT1Q06210 699 aaPredicted RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 ITKQ08881 620 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 NR1I3Q14994 352 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 SLC18A3Q16572 532 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 ZNF564Q8TBZ8 553 aaPredicted RBP10.23□□□□□ -0.77
UFD1-205ENST00000459854 CALML6Q8TD86 181 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 TRPC4APQ8TEL6 797 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 PPP1R14BQ96C90 147 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 GINS4Q9BRT9 223 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 FANCEQ9HB96 536 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 RXFP1Q9HBX9 757 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 TMBIM4Q9HC24 238 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 TRPC7Q9HCX4 862 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 PKD2L1Q9P0L9 805 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 SEL1LQ9UBV2 794 aa10.23□□□□□ -0.77
UFD1-205ENST00000459854 ARHGEF37A1IGU5 675 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.22□□□□□ -0.77
UFD1-205ENST00000459854 ZNF543Q08ER8 600 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 RCN1Q15293 331 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 HIF1AQ16665 826 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms