RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-223ENST00000459783 SOWAHAQ2M3V2 549 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 CTXN3Q4LDR2 81 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 DSTYKQ6XUX3 929 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 ANKS3Q6ZW76 656 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 INTS8Q75QN2 995 aaKnown RBP11.05□□□□□ -0.64
MRPL55-223ENST00000459783 IRF2BP1Q8IU81 584 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 PDCL2Q8N4E4 241 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 SMRP1Q8NCR6 262 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 KBTBD7Q8WVZ9 684 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 PPP2R3CQ969Q6 453 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 SLC35C1Q96A29 364 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 HPDLQ96IR7 371 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 ZNF560Q96MR9 790 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 TSG101Q99816 390 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 CRISPLD1Q9H336 500 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.05□□□□□ -0.64
MRPL55-223ENST00000459783 GDAP2Q9NXN4 497 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 FBXW11Q9UKB1 542 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 POLIQ9UNA4 740 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 FRMD4BQ9Y2L6 1034 aa11.05□□□□□ -0.64
MRPL55-223ENST00000459783 SLC16A3O15427 465 aaKnown RBP11.04□□□□□ -0.64
MRPL55-223ENST00000459783 MBTPS2O43462 519 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 NCK2O43639 380 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 RFPL2O75678 378 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 SEC24AO95486 1093 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 MBD3O95983 291 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 GLUD1P00367 558 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 HLA-DRAP01903 254 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 BMP1P13497 986 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 IL9P15248 144 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 PPP1R2P41236 205 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 YWHAHQ04917 246 aaPredicted RBP11.04□□□□□ -0.64
MRPL55-223ENST00000459783 STIM1Q13586 685 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 BMS1Q14692 1282 aaKnown RBP11.04□□□□□ -0.64
MRPL55-223ENST00000459783 SV2CQ496J9 727 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 OVOS1Q6IE37 1185 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 SPOPLQ6IQ16 392 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 ZNF280DQ6N043 979 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 LRRTM3Q86VH5 581 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 MLKLQ8NB16 471 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 TAS1R2Q8TE23 839 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 CASP10Q92851 521 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 SEMA4DQ92854 862 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 ZNF707Q96C28 371 aaPredicted RBP11.04□□□□□ -0.64
MRPL55-223ENST00000459783 ASB2Q96Q27 587 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 SDCBP2Q9H190 292 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 APOBEC3GQ9HC16 384 aaKnown RBP11.04□□□□□ -0.64
MRPL55-223ENST00000459783 MAN1C1Q9NR34 630 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 RWDD2AQ9UIY3 292 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 CD207Q9UJ71 328 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 SSX2IPQ9Y2D8 614 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 SNX9Q9Y5X1 595 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 PRUNE2Q8WUY3 3088 aa11.04□□□□□ -0.64
MRPL55-223ENST00000459783 GABRDO14764 452 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 IKBKBO14920 756 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 ABLIM3O94929 683 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 PAPLNO95428 1278 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 STAU1O95793 577 aaKnown RBP11.03□□□□□ -0.64
MRPL55-223ENST00000459783 EPB41P11171 864 aaKnown RBP11.03□□□□□ -0.64
MRPL55-223ENST00000459783 ODC1P11926 461 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 PNPLA4P41247 253 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 ARPP19P56211 112 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 ENPEPQ07075 957 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 BIRC3Q13489 604 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 NCOA4Q13772 614 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 CBWD6Q4V339 395 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 CBWD3Q5JTY5 395 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 CBWD5Q5RIA9 395 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 RARS2Q5T160 578 aaKnown RBP11.03□□□□□ -0.64
MRPL55-223ENST00000459783 CCDC183Q5T5S1 534 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 PDXDC1Q6P996 788 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 RNF19BQ6ZMZ0 732 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 C11orf57Q6ZUT1 292 aaPredicted RBP11.03□□□□□ -0.64
MRPL55-223ENST00000459783 FILIP1Q7Z7B0 1213 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 PPFIBP1Q86W92 1011 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 TTC9BQ8N6N2 239 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 KREMEN2Q8NCW0 462 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 APPL2Q8NEU8 664 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 ATXN2LQ8WWM7 1075 aaKnown RBP11.03□□□□□ -0.64
MRPL55-223ENST00000459783 SUSD6Q92537 303 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 CEP63Q96MT8 703 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 PKMYT1Q99640 499 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 MRPL45Q9BRJ2 306 aaKnown RBP11.03□□□□□ -0.64
MRPL55-223ENST00000459783 PI4K2AQ9BTU6 479 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 SRRTQ9BXP5 876 aaKnown RBP11.03□□□□□ -0.64
MRPL55-223ENST00000459783 MMRN2Q9H8L6 949 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 VRTNQ9H8Y1 702 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.03□□□□□ -0.641e-6■■■■■ 55.8
MRPL55-223ENST00000459783 TMLHEQ9NVH6 421 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 RAPGEFL1Q9UHV5 662 aa11.03□□□□□ -0.64
MRPL55-223ENST00000459783 USP15Q9Y4E8 981 aaPredicted RBP11.03□□□□□ -0.64
MRPL55-223ENST00000459783 BICDL2A1A5D9 508 aa11.02□□□□□ -0.65
MRPL55-223ENST00000459783 H7C4K7 107 aa11.02□□□□□ -0.65
MRPL55-223ENST00000459783 ASS1P00966 412 aaKnown RBP11.02□□□□□ -0.65
MRPL55-223ENST00000459783 KRT13P13646 458 aa11.02□□□□□ -0.65
MRPL55-223ENST00000459783 PAX3P23760 479 aa11.02□□□□□ -0.65
MRPL55-223ENST00000459783 ACAT1P24752 427 aaKnown RBP11.02□□□□□ -0.65
MRPL55-223ENST00000459783 LMO2P25791 158 aa11.02□□□□□ -0.65
MRPL55-223ENST00000459783 RAP1GAPP47736 663 aa11.02□□□□□ -0.65
MRPL55-223ENST00000459783 AP3M2P53677 418 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms