RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 LRRC52Q8N7C0 313 aa13.15□□□□□ -0.3
CNOT3-205ENST00000457463 APPL2Q8NEU8 664 aa13.15□□□□□ -0.3
CNOT3-205ENST00000457463 OR10T2Q8NGX3 314 aa13.15□□□□□ -0.3
CNOT3-205ENST00000457463 TMC2Q8TDI7 906 aa13.15□□□□□ -0.3
CNOT3-205ENST00000457463 HPDLQ96IR7 371 aa13.15□□□□□ -0.3
CNOT3-205ENST00000457463 TSG101Q99816 390 aa13.15□□□□□ -0.3
CNOT3-205ENST00000457463 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.15□□□□□ -0.38e-8■■■■■ 44.9
CNOT3-205ENST00000457463 TMEM63CQ9P1W3 806 aa13.15□□□□□ -0.3
CNOT3-205ENST00000457463 CD207Q9UJ71 328 aa13.15□□□□□ -0.3
CNOT3-205ENST00000457463 L1RE1Q9UN81 338 aa13.15□□□□□ -0.3
CNOT3-205ENST00000457463 SNX9Q9Y5X1 595 aa13.15□□□□□ -0.3
CNOT3-205ENST00000457463 A0A0C4DFX4 3053 aa13.15□□□□□ -0.3
CNOT3-205ENST00000457463 C5orf42Q9H799 3197 aa13.15□□□□□ -0.3
CNOT3-205ENST00000457463 WDR27A2RRH5 827 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 OAZ2O95190 189 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 VNN2O95498 520 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 CYP11A1P05108 521 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 ODC1P11926 461 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 TYMPP19971 482 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 PAK1Q13153 545 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 BIRC3Q13489 604 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 CCDC142Q17RM4 750 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 PTCRAQ6ISU1 281 aaPredicted RBP13.14□□□□□ -0.31
CNOT3-205ENST00000457463 SLC8B1Q6J4K2 584 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 ZNF280DQ6N043 979 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 TMC5Q6UXY8 1006 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 C15orf39Q6ZRI6 1047 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 RBM43Q6ZSC3 357 aaKnown RBP13.14□□□□□ -0.31
CNOT3-205ENST00000457463 INTS8Q75QN2 995 aaKnown RBP13.14□□□□□ -0.31
CNOT3-205ENST00000457463 PPFIBP1Q86W92 1011 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 PDCL2Q8N4E4 241 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 SMRP1Q8NCR6 262 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 KREMEN2Q8NCW0 462 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 ZNF560Q96MR9 790 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 NECAB3Q96P71 396 aaPredicted RBP13.14□□□□□ -0.31
CNOT3-205ENST00000457463 MKNK1Q9BUB5 465 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 GTPBP4Q9BZE4 634 aaKnown RBP13.14□□□□□ -0.31
CNOT3-205ENST00000457463 XYLT2Q9H1B5 865 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 FBXW11Q9UKB1 542 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 POLIQ9UNA4 740 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 USP15Q9Y4E8 981 aaPredicted RBP13.14□□□□□ -0.31
CNOT3-205ENST00000457463 NME7Q9Y5B8 376 aa13.14□□□□□ -0.31
CNOT3-205ENST00000457463 H7C4K7 107 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 SEC24AO95486 1093 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 EPB41P11171 864 aaKnown RBP13.13□□□□□ -0.31
CNOT3-205ENST00000457463 KRT13P13646 458 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 PNPLA4P41247 253 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 NLRP12P59046 1061 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 MCCD1P59942 119 aaPredicted RBP13.13□□□□□ -0.31
CNOT3-205ENST00000457463 CREMQ03060 361 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 NCOA4Q13772 614 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 SOWAHAQ2M3V2 549 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 ZACNQ401N2 412 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 OVOS1Q6IE37 1185 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 SPOPLQ6IQ16 392 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 PDXDC1Q6P996 788 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 USP37Q86T82 979 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 LRRTM3Q86VH5 581 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 TAS1R2Q8TE23 839 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 PGLYRP2Q96PD5 576 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 MRPL45Q9BRJ2 306 aaKnown RBP13.13□□□□□ -0.31
CNOT3-205ENST00000457463 PI4K2AQ9BTU6 479 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 CRISPLD1Q9H336 500 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 GDAP2Q9NXN4 497 aa13.13□□□□□ -0.31
CNOT3-205ENST00000457463 TSC2P49815 1807 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 IKBKBO14920 756 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 SLC16A3O15427 465 aaKnown RBP13.12□□□□□ -0.31
CNOT3-205ENST00000457463 PHACTR2O75167 634 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 ABLIM3O94929 683 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 MBD3O95983 291 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 ACAT1P24752 427 aaKnown RBP13.12□□□□□ -0.31
CNOT3-205ENST00000457463 PPP1R2P41236 205 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 SMAD4Q13485 552 aaKnown RBP13.12□□□□□ -0.31
CNOT3-205ENST00000457463 TRPC3Q13507 836 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 CBWD6Q4V339 395 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 DCAF17Q5H9S7 520 aaPredicted RBP13.12□□□□□ -0.31
CNOT3-205ENST00000457463 CBWD3Q5JTY5 395 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 CBWD5Q5RIA9 395 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 RNF19BQ6ZMZ0 732 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 LIMS2Q7Z4I7 341 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 FILIP1Q7Z7B0 1213 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 KBTBD7Q8WVZ9 684 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 SUSD6Q92537 303 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 SEMA4DQ92854 862 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 ZNF707Q96C28 371 aaPredicted RBP13.12□□□□□ -0.31
CNOT3-205ENST00000457463 SRRTQ9BXP5 876 aaKnown RBP13.12□□□□□ -0.31
CNOT3-205ENST00000457463 RWDD2AQ9UIY3 292 aa13.12□□□□□ -0.31
CNOT3-205ENST00000457463 CCDC195A0A1B0GUA6 201 aa13.11□□□□□ -0.31
CNOT3-205ENST00000457463 BICDL2A1A5D9 508 aa13.11□□□□□ -0.31
CNOT3-205ENST00000457463 FSD2A1L4K1 749 aa13.11□□□□□ -0.31
CNOT3-205ENST00000457463 HUS1O60921 280 aa13.11□□□□□ -0.31
CNOT3-205ENST00000457463 HLA-DRAP01903 254 aa13.11□□□□□ -0.31
CNOT3-205ENST00000457463 C8AP07357 584 aa13.11□□□□□ -0.31
CNOT3-205ENST00000457463 SRGAP2BP0DMP2 458 aa13.11□□□□□ -0.31
CNOT3-205ENST00000457463 CPB1P15086 417 aa13.11□□□□□ -0.31
CNOT3-205ENST00000457463 HOXB8P17481 243 aaPredicted RBP13.11□□□□□ -0.31
CNOT3-205ENST00000457463 PAX3P23760 479 aa13.11□□□□□ -0.31
CNOT3-205ENST00000457463 LMO2P25791 158 aa13.11□□□□□ -0.31
CNOT3-205ENST00000457463 RAP1GAPP47736 663 aa13.11□□□□□ -0.31
CNOT3-205ENST00000457463 AP3M2P53677 418 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms