RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 ZNF263O14978 683 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 CHADO15335 359 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 LRP3O75074 770 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 ADRB1P08588 477 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 HARSP12081 509 aaKnown RBP12.96□□□□□ -0.33
LMCD1-206ENST00000456506 PLS3P13797 630 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 CPB1P15086 417 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 TNFSF9P41273 254 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 SLC12A3P55017 1021 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 DUSP4Q13115 394 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 SRSF5Q13243 272 aaKnown RBP12.96□□□□□ -0.33
LMCD1-206ENST00000456506 GPR17Q13304 367 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 ARSHQ5FYA8 562 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 IQCEQ6IPM2 695 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 CENPPQ6IPU0 288 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 GAREM2Q75VX8 874 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 ELMOD1Q8N336 334 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 SPEM1Q8N4L4 309 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 TTC9BQ8N6N2 239 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 SYT2Q8N9I0 419 aaPredicted RBP12.96□□□□□ -0.33
LMCD1-206ENST00000456506 LRRC15Q8TF66 581 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 SECISBP2LQ93073 1101 aaKnown RBP12.96□□□□□ -0.33
LMCD1-206ENST00000456506 CHFRQ96EP1 664 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 MSANTD3Q96H12 275 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 TMEM209Q96SK2 561 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 TCHPQ9BT92 498 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 TIPINQ9BVW5 301 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 PLEKHA5Q9HAU0 1116 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 RBM12Q9NTZ6 932 aaKnown RBP12.96□□□□□ -0.33
LMCD1-206ENST00000456506 USP18Q9UMW8 372 aa12.96□□□□□ -0.33
LMCD1-206ENST00000456506 NOL7Q9UMY1 257 aaKnown RBP12.96□□□□□ -0.33
LMCD1-206ENST00000456506 TPRP12270 2363 aaKnown RBP12.96□□□□□ -0.33
LMCD1-206ENST00000456506 MTMR11A4FU01 709 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 SLC38A8A6NNN8 435 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 CHURC1-FNTBB4DL54 471 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 LAD1O00515 517 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 SLC30A4O14863 429 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 RETP07949 1114 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 CYP3A5P20815 502 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 CTHP32929 405 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 CXCL12P48061 93 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 FNTBP49356 437 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 GUCY2FP51841 1108 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 NCKAP1LP55160 1127 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 HMGN5P82970 282 aaKnown RBP12.95□□□□□ -0.34
LMCD1-206ENST00000456506 CCINQ13939 588 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 ENOX2Q16206 610 aaKnown RBP12.95□□□□□ -0.34
LMCD1-206ENST00000456506 KRT79Q5XKE5 535 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 ARID3BQ8IVW6 561 aaPredicted RBP12.95□□□□□ -0.34
LMCD1-206ENST00000456506 E2F7Q96AV8 911 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 OXCT2Q9BYC2 517 aaPredicted RBP12.95□□□□□ -0.34
LMCD1-206ENST00000456506 IL21Q9HBE4 155 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 GMEB2Q9UKD1 530 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 CFAP47Q6ZTR5 3102 aa12.95□□□□□ -0.34
LMCD1-206ENST00000456506 CEP192Q8TEP8 1941 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 PLXND1Q9Y4D7 1925 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 NPHP3-ACAD11A0A0J9YXS1 232 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 OR6C75A6NL08 312 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 LACTBL1A8MY62 500 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 SPECC1L-ADORA2AF8WAN1 911 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 CLDN3O15551 220 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 PRAMEF12O95522 483 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 CLTAP09496 248 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 TYMPP19971 482 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 WEE1P30291 646 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 HOXA6P31267 233 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 ATP2C1P98194 919 aaPredicted RBP12.94□□□□□ -0.34
LMCD1-206ENST00000456506 CACNB1Q02641 598 aaPredicted RBP12.94□□□□□ -0.34
LMCD1-206ENST00000456506 RAD51AP2Q09MP3 1159 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 STRN3Q13033 797 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 CSRP2Q16527 193 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 TMEM119Q4V9L6 283 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 PRR23CQ6ZRP0 262 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 DNAJB7Q7Z6W7 309 aaPredicted RBP12.94□□□□□ -0.34
LMCD1-206ENST00000456506 GPIHBP1Q8IV16 184 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 ATAD1Q8NBU5 361 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 OR10T2Q8NGX3 314 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 NETO1Q8TDF5 533 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 PSMG2Q969U7 264 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 ZFYVE19Q96K21 471 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 RAB34Q9BZG1 259 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 C8orf33Q9H7E9 229 aaPredicted RBP12.94□□□□□ -0.34
LMCD1-206ENST00000456506 SEMA4GQ9NTN9 838 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 GTSE1Q9NYZ3 720 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 UBQLN1Q9UMX0 589 aaKnown RBP12.94□□□□□ -0.34
LMCD1-206ENST00000456506 SLC27A5Q9Y2P5 690 aa12.94□□□□□ -0.34
LMCD1-206ENST00000456506 GDF9O60383 454 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 SOAT2O75908 522 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 PIGRP01833 764 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 ATF6P18850 670 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 MARCKSP29966 332 aaPredicted RBP12.93□□□□□ -0.34
LMCD1-206ENST00000456506 CNR2P34972 360 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 LILRA4P59901 499 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 PLD1Q13393 1074 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 SIM2Q14190 667 aaPredicted RBP12.93□□□□□ -0.34
LMCD1-206ENST00000456506 MYBPC2Q14324 1141 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 PPP2R5DQ14738 602 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 SPATA1Q5VX52 437 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 SLC39A4Q6P5W5 647 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 PKN3Q6P5Z2 889 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms