RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 C8orf76Q96K31 380 aa15.57■□□□□ 0.08
LYSMD3-202ENST00000453259 LLPHQ9BRT6 129 aaKnown RBP15.57■□□□□ 0.08
LYSMD3-202ENST00000453259 ANGPTL2Q9UKU9 493 aa15.57■□□□□ 0.08
LYSMD3-202ENST00000453259 UBQLN1Q9UMX0 589 aaKnown RBP15.57■□□□□ 0.08
LYSMD3-202ENST00000453259 PDCD11Q14690 1871 aaKnown RBP15.57■□□□□ 0.08
LYSMD3-202ENST00000453259 CHD8Q9HCK8 2581 aa15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 A0A1W2PRU2 124 aa15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 SLC38A8A6NNN8 435 aa15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 NRG2O14511 850 aaPredicted RBP15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 CLDN3O15551 220 aa15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 ATG13O75143 517 aa15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 LARGE1O95461 756 aa15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 CLTAP09496 248 aa15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 MCL1Q07820 350 aa15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 ZNF174Q15697 407 aa15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 ECM1Q16610 540 aa15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 ARID3BQ8IVW6 561 aaPredicted RBP15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 FAM160A2Q8N612 972 aaPredicted RBP15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 THG1LQ9NWX6 298 aaKnown RBP15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 PCDHGA5Q9Y5G8 931 aa15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 NUP210Q8TEM1 1887 aaPredicted RBP15.56■□□□□ 0.08
LYSMD3-202ENST00000453259 MAP1BP46821 2468 aaKnown RBP15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 NCANO14594 1321 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 TTC26A0AVF1 554 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 SOBPA7XYQ1 873 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 ZNF806P0C7X5 589 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 PRPHP41219 470 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 HMGN5P82970 282 aaKnown RBP15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 AMPD2Q01433 879 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 DMWDQ09019 674 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 SMARCB1Q12824 385 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 MAPK7Q13164 816 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 GNL2Q13823 731 aaKnown RBP15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 CENPPQ6IPU0 288 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 RINT1Q6NUQ1 792 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 C1orf186Q6ZWK4 172 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 C4orf32Q8N8J7 132 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 C12orf50Q8NA57 414 aaPredicted RBP15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 FBXO18Q8NFZ0 1043 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 GAB3Q8WWW8 586 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 EXOC4Q96A65 974 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 CHAMP1Q96JM3 812 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 DNAJC25Q9H1X3 360 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 ANKFY1Q9P2R3 1169 aa15.55■□□□□ 0.08
LYSMD3-202ENST00000453259 MEFVO15553 781 aaPredicted RBP15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 DTNBO60941 627 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 PLS3P13797 630 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 GJA1P17302 382 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 CDC25CP30307 473 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 TUFMP49411 452 aaKnown RBP15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 PPP2R3AQ06190 1150 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 DUSP4Q13115 394 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 VEPH1Q14D04 833 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 ZBTB6Q15916 424 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 ITPRIPL2Q3MIP1 535 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 AASDHQ4L235 1098 aaPredicted RBP15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 OVOS1Q6IE37 1185 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 ARMCX5Q6P1M9 558 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 CACNA2D4Q7Z3S7 1137 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 TMEM161BQ8NDZ6 487 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 BPIFB1Q8TDL5 484 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 C2orf15Q8WU43 125 aaKnown RBP15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 RSPRY1Q96DX4 576 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 GCNAQ96QF7 691 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 TASP1Q9H6P5 420 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 TUBGCP4Q9UGJ1 667 aa15.54■□□□□ 0.08
LYSMD3-202ENST00000453259 USP24Q9UPU5 2620 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 GREB1Q4ZG55 1949 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 SLC16A4O15374 487 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 EPN2O95208 641 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 VNN2O95498 520 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 MAPTP10636 758 aaKnown RBP15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 ODC1P11926 461 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 PMLP29590 882 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 ABCD1P33897 745 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 RAP1GAPP47736 663 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 MCM2P49736 904 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 NEK4P51957 841 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 TXNDC11Q6PKC3 985 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 Q6ZS52 159 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 GAREM2Q75VX8 874 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 DNAJB7Q7Z6W7 309 aaPredicted RBP15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 CD302Q8IX05 232 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 CAMKK1Q8N5S9 505 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 MKNK1Q9BUB5 465 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 RUSC1Q9BVN2 902 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 POLD4Q9HCU8 107 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 RBM12Q9NTZ6 932 aaKnown RBP15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 LARSQ9P2J5 1176 aaKnown RBP15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 DSEQ9UL01 958 aa15.53■□□□□ 0.08
LYSMD3-202ENST00000453259 RALGAPA1Q6GYQ0 2036 aa15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 MTMR11A4FU01 709 aa15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 E9PMD0 336 aa15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 TM4SF5O14894 197 aa15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 RPP40O75818 363 aaKnown RBP15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 ADRB2P07550 413 aa15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 CXCL8P10145 99 aa15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 HARSP12081 509 aaKnown RBP15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 U2AF2P26368 475 aaKnown RBP eCLIP15.52■□□□□ 0.083e-31■■■■■ 109.2
LYSMD3-202ENST00000453259 FOSBP53539 338 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms