RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 KRIT1O00522 736 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 LSM8O95777 96 aaKnown RBP18.86■□□□□ 0.61
LMNA-208ENST00000448611 FGGP02679 453 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 C6orf222P0C671 652 aaPredicted RBP18.86■□□□□ 0.61
LMNA-208ENST00000448611 CTNNA2P26232 953 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 POLR2BP30876 1174 aaKnown RBP18.86■□□□□ 0.61
LMNA-208ENST00000448611 CTNNA1P35221 906 aaKnown RBP18.86■□□□□ 0.61
LMNA-208ENST00000448611 PLA2G4AP47712 749 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 RAP1GAPP47736 663 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 GUCY2FP51841 1108 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 GJA9P57773 515 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 C1QBPQ07021 282 aaKnown RBP18.86■□□□□ 0.61
LMNA-208ENST00000448611 SNX17Q15036 470 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 MAP9Q49MG5 647 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 LIN9Q5TKA1 542 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 MMS22LQ6ZRQ5 1243 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 HDXQ7Z353 690 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 KLHL7Q8IXQ5 586 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 KRT222Q8N1A0 295 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 C7orf31Q8N865 590 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 PCDHGC3Q9UN70 934 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 KPNA6O60684 536 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 GLI1P08151 1106 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 ITGA4P13612 1032 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 MMP8P22894 467 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 TNFRSF8P28908 595 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 AXLP30530 894 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 FLT3LGP49771 235 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 CDH8P55286 799 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 ZNF211Q13398 564 aaPredicted RBP18.85■□□□□ 0.61
LMNA-208ENST00000448611 MFSD14CQ5VZR4 134 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 PLEKHA7Q6IQ23 1121 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 KIF12Q96FN5 646 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 CFHR5Q9BXR6 569 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 TRIM7Q9C029 511 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 CXCL16Q9H2A7 254 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 SMYD3Q9H7B4 428 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 DPP3Q9NY33 737 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 SNTG2Q9NY99 539 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 AGAP1Q9UPQ3 857 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 DERAQ9Y315 318 aa18.85■□□□□ 0.61
LMNA-208ENST00000448611 CCDC66A2RUB6 948 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 SPOPO43791 374 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 STAU1O95793 577 aaKnown RBP18.84■□□□□ 0.61
LMNA-208ENST00000448611 GNAT1P11488 350 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 CDH5P33151 784 aaPredicted RBP18.84■□□□□ 0.61
LMNA-208ENST00000448611 RBP5P82980 135 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 MAMLD1Q13495 774 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 PHLDB2Q86SQ0 1253 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 GSPT2Q8IYD1 628 aaKnown RBP18.84■□□□□ 0.61
LMNA-208ENST00000448611 NME8Q8N427 588 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 WHAMMQ8TF30 809 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 HPDLQ96IR7 371 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 SNX27Q96L92 541 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 GDF3Q9NR23 364 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 PCDHA3Q9Y5H8 950 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 RAD51CO43502 376 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 RAD23BP54727 409 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 CBX1P83916 185 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 GNASQ5JWF2 1037 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 WDTC1Q8N5D0 677 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 TMEM35BQ8NCS4 154 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 ZMAT2Q96NC0 199 aaKnown RBP18.84■□□□□ 0.61
LMNA-208ENST00000448611 ZNF518BQ9C0D4 1074 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 UPF3AQ9H1J1 476 aaKnown RBP18.84■□□□□ 0.61
LMNA-208ENST00000448611 CYP3A43Q9HB55 503 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 SAGE1Q9NXZ1 904 aa18.84■□□□□ 0.61
LMNA-208ENST00000448611 CITO14578 2027 aa18.83■□□□□ 0.61
LMNA-208ENST00000448611 TRIP12Q14669 1992 aaPredicted RBP18.83■□□□□ 0.61
LMNA-208ENST00000448611 RALGAPA2Q2PPJ7 1873 aa18.83■□□□□ 0.61
LMNA-208ENST00000448611 HEXIM1O94992 359 aaKnown RBP18.83■□□□□ 0.6
LMNA-208ENST00000448611 PAEPP09466 180 aa18.83■□□□□ 0.6
LMNA-208ENST00000448611 CRYBB1P53674 252 aaPredicted RBP18.83■□□□□ 0.6
LMNA-208ENST00000448611 PRKCZQ05513 592 aa18.83■□□□□ 0.6
LMNA-208ENST00000448611 CASP8Q14790 479 aa18.83■□□□□ 0.6
LMNA-208ENST00000448611 CLUL1Q15846 466 aa18.83■□□□□ 0.6
LMNA-208ENST00000448611 C1orf131Q8NDD1 294 aaKnown RBP18.83■□□□□ 0.6
LMNA-208ENST00000448611 AENQ8WTP8 325 aaKnown RBP18.83■□□□□ 0.6
LMNA-208ENST00000448611 NAP1L3Q99457 506 aaPredicted RBP18.83■□□□□ 0.6
LMNA-208ENST00000448611 MTG1Q9BT17 334 aaPredicted RBP18.83■□□□□ 0.6
LMNA-208ENST00000448611 MRPL47Q9HD33 250 aaKnown RBP18.83■□□□□ 0.6
LMNA-208ENST00000448611 NR2E1Q9Y466 385 aa18.83■□□□□ 0.6
LMNA-208ENST00000448611 HES2Q9Y543 173 aa18.83■□□□□ 0.6
LMNA-208ENST00000448611 MYO1FO00160 1098 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 SART1O43290 800 aaKnown RBP18.82■□□□□ 0.6
LMNA-208ENST00000448611 CILPO75339 1184 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 P4HA1P13674 534 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 SLC1A1P43005 524 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 NKX3-2P78367 333 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 SP3Q02447 781 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 ZBTB6Q15916 424 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 AADACL2Q6P093 401 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 ALKAL1Q6UXT8 129 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 IFT20Q8IY31 132 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 TWNKQ96RR1 684 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 UBXN6Q9BZV1 441 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 DDX47Q9H0S4 455 aaKnown RBP18.82■□□□□ 0.6
LMNA-208ENST00000448611 NXF3Q9H4D5 531 aaKnown RBP18.82■□□□□ 0.6
LMNA-208ENST00000448611 HMGXB4Q9UGU5 601 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 SCINQ9Y6U3 715 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms