RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 BCL7CQ8WUZ0 217 aaPredicted RBP8.12□□□□□ -1.11
AC004540.1-206ENST00000448056 SEMA4DQ92854 862 aa8.12□□□□□ -1.11
AC004540.1-206ENST00000448056 HPDLQ96IR7 371 aa8.12□□□□□ -1.11
AC004540.1-206ENST00000448056 SAMD11Q96NU1 681 aa8.12□□□□□ -1.11
AC004540.1-206ENST00000448056 XYLT2Q9H1B5 865 aa8.12□□□□□ -1.11
AC004540.1-206ENST00000448056 VPS16Q9H269 839 aa8.12□□□□□ -1.11
AC004540.1-206ENST00000448056 MARCH5Q9NX47 278 aa8.12□□□□□ -1.11
AC004540.1-206ENST00000448056 RAB20Q9NX57 234 aa8.12□□□□□ -1.11
AC004540.1-206ENST00000448056 TAB2Q9NYJ8 693 aa8.12□□□□□ -1.11
AC004540.1-206ENST00000448056 ADAM28Q9UKQ2 775 aa8.12□□□□□ -1.11
AC004540.1-206ENST00000448056 PRG3Q9Y2Y8 225 aaPredicted RBP8.12□□□□□ -1.11
AC004540.1-206ENST00000448056 R3HCC1Q9Y3T6 440 aaKnown RBP8.12□□□□□ -1.11
AC004540.1-206ENST00000448056 PTPRSQ13332 1948 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 FNDC1Q4ZHG4 1894 aaPredicted RBP8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 GTPBP10A4D1E9 387 aaKnown RBP8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 KPNA7A9QM74 516 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 TRAPPC3O43617 180 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 LRRN2O75325 713 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 FGF18O76093 207 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 STAU1O95793 577 aaKnown RBP8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 SERPINC1P01008 464 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 CTNNB1P35222 781 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 PPM1AP35813 382 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 BRCC3P46736 316 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 AARSP49588 968 aaKnown RBP eCLIP8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 TAF6P49848 677 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 FANCCQ00597 558 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 MYL7Q01449 175 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 PLCB3Q01970 1234 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 TIGD5Q53EQ6 642 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 TAS1R1Q7RTX1 841 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 DDX53Q86TM3 631 aaKnown RBP8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 EHBP1Q8NDI1 1231 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 LMO3Q8TAP4 145 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 SPPL3Q8TCT6 385 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 HASPINQ8TF76 798 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 TAF4BQ92750 862 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 TMEM169Q96HH4 297 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 SUSD3Q96L08 255 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 SENP8Q96LD8 212 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 ZNF560Q96MR9 790 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 NAP1L5Q96NT1 182 aaPredicted RBP8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 PI4K2AQ9BTU6 479 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 GPR62Q9BZJ7 368 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 VRTNQ9H8Y1 702 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 CERS4Q9HA82 394 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 GDAP2Q9NXN4 497 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 PUF60Q9UHX1 559 aaKnown RBP8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 MTUS1Q9ULD2 1270 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 NUB1Q9Y5A7 615 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 CHD9Q3L8U1 2897 aa8.11□□□□□ -1.11
AC004540.1-206ENST00000448056 CITO14578 2027 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 A0A1B0GTH6 734 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 LGALS16A8MUM7 142 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 H3BNC9 293 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 I3L4J1 428 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 M0QZQ0 153 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 PES1O00541 588 aaKnown RBP8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 SOX1O00570 391 aaPredicted RBP8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 CYB561D2O14569 222 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 RNF40O75150 1001 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 ASS1P00966 412 aaKnown RBP8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 CFHP08603 1231 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 PON1P27169 355 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 PIK3CAP42336 1068 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 UBXN1Q04323 297 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 KCNMA1Q12791 1236 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 ELAVL2Q12926 359 aaKnown RBP8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 NR1I3Q14994 352 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 EXOC3L4Q17RC7 722 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 ZNF699Q32M78 642 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 WDR72Q3MJ13 1102 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 SV2CQ496J9 727 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 FILIP1LQ4L180 1135 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 WDR44Q5JSH3 913 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 FKBP15Q5T1M5 1219 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 FAM171A1Q5VUB5 890 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 SPOPLQ6IQ16 392 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 FUT10Q6P4F1 479 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 DSTYKQ6XUX3 929 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 GBP6Q6ZN66 633 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 LIMS2Q7Z4I7 341 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 RNF168Q8IYW5 571 aaPredicted RBP8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 VPS52Q8N1B4 723 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 CCDC150Q8NCX0 1101 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 ARNTL2Q8WYA1 636 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 ELMO3Q96BJ8 720 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 CRACR2AQ9BSW2 395 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 C11orf84Q9BUA3 381 aaPredicted RBP8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 VN1R3Q9BXE9 311 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 ZNF576Q9H609 170 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 APOBEC3GQ9HC16 384 aaKnown RBP8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 ALG13Q9NP73 1137 aaKnown RBP8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 CHST7Q9NS84 486 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 NXF1Q9UBU9 619 aaKnown RBP8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 STK39Q9UEW8 545 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 LZTS1Q9Y250 596 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 SNX9Q9Y5X1 595 aa8.1□□□□□ -1.11
AC004540.1-206ENST00000448056 TRIP11Q15643 1979 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms