RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 SLC38A7Q9NVC3 462 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 PPP4R2Q9NY27 417 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 ANKFY1Q9P2R3 1169 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 EBF1Q9UH73 591 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 METRNQ9UJH8 293 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 GDAQ9Y2T3 454 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 GPSM3Q9Y4H4 160 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 KALRNO60229 2985 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 SMIM28A0A1B0GU29 152 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 PODXLO00592 558 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 TRDMT1O14717 391 aaKnown RBP7.77□□□□□ -1.17
LRRC28-203ENST00000447360 HYAL3O43820 417 aaPredicted RBP7.77□□□□□ -1.17
LRRC28-203ENST00000447360 MARCH6O60337 910 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 CCNT1O60563 726 aaKnown RBP7.77□□□□□ -1.17
LRRC28-203ENST00000447360 BAG4O95429 457 aaKnown RBP7.77□□□□□ -1.17
LRRC28-203ENST00000447360 FGF19O95750 216 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 CAPNS1P04632 268 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 C7P10643 843 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 CPA1P15085 419 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 RPL9P32969 192 aaKnown RBP7.77□□□□□ -1.17
LRRC28-203ENST00000447360 HSPA4P34932 840 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 RDXP35241 583 aaKnown RBP7.77□□□□□ -1.17
LRRC28-203ENST00000447360 AMPD2Q01433 879 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 PLD1Q13393 1074 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 FBXO43Q4G163 708 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 XKR4Q5GH76 650 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 ZNF280DQ6N043 979 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 ALKAL1Q6UXT8 129 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 APBB1IPQ7Z5R6 666 aaPredicted RBP7.77□□□□□ -1.17
LRRC28-203ENST00000447360 TMC8Q8IU68 726 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 MCPH1Q8NEM0 835 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 DEFB124Q8NES8 71 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 APPL2Q8NEU8 664 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 BEST2Q8NFU1 509 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 BPIFB1Q8TDL5 484 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 SLC39A7Q92504 469 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 ZFYVE19Q96K21 471 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 EIF2AK1Q9BQI3 630 aaKnown RBP7.77□□□□□ -1.17
LRRC28-203ENST00000447360 MKNK1Q9BUB5 465 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 OXCT2Q9BYC2 517 aaPredicted RBP7.77□□□□□ -1.17
LRRC28-203ENST00000447360 AGXT2Q9BYV1 514 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 GOLGA2P5Q9HBQ8 144 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 TOPORSQ9NS56 1045 aaPredicted RBP7.77□□□□□ -1.17
LRRC28-203ENST00000447360 THG1LQ9NWX6 298 aaKnown RBP7.77□□□□□ -1.17
LRRC28-203ENST00000447360 ASB3Q9Y575 518 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 SNX14Q9Y5W7 946 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 VWA8A3KMH1 1905 aa7.77□□□□□ -1.17
LRRC28-203ENST00000447360 SPAG17Q6Q759 2223 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 TICRRQ7Z2Z1 1910 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 CCDC194A0A1B0GVG4 234 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 UPK3BL1B0FP48 263 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 UPK3BL2E5RIL1 263 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 DCLK1O15075 740 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 USO1O60763 962 aaKnown RBP7.76□□□□□ -1.17
LRRC28-203ENST00000447360 RNF40O75150 1001 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 DEXIO95424 95 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 APBB3O95704 486 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 NEFLP07196 543 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 DRD1P21728 446 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 MCM2P49736 904 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 YARSP54577 528 aaKnown RBP7.76□□□□□ -1.17
LRRC28-203ENST00000447360 EPHB3P54753 998 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 EVCP57679 992 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 SOX4Q06945 474 aaPredicted RBP7.76□□□□□ -1.17
LRRC28-203ENST00000447360 TNK2Q07912 1038 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 SSRP1Q08945 709 aaKnown RBP7.76□□□□□ -1.17
LRRC28-203ENST00000447360 LMAN2Q12907 356 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 ARHGAP15Q53QZ3 475 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 STXBP5Q5T5C0 1151 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 PMS2CLQ68D20 193 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 FSTL4Q6MZW2 842 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 KIAA1211LQ6NV74 962 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 RNF19BQ6ZMZ0 732 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 SYT13Q7L8C5 426 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 PDZD3Q86UT5 571 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 PIGOQ8TEQ8 1089 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 EXOC4Q96A65 974 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 SUSD3Q96L08 255 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 CCDC113Q9H0I3 377 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 DNAJC25Q9H1X3 360 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 GPRC5CQ9NQ84 441 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 EVLQ9UI08 416 aaPredicted RBP7.76□□□□□ -1.17
LRRC28-203ENST00000447360 KLK13Q9UKR3 277 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 PCDHA12Q9UN75 941 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 YIPF1Q9Y548 306 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 NUB1Q9Y5A7 615 aa7.76□□□□□ -1.17
LRRC28-203ENST00000447360 MEFVO15553 781 aaPredicted RBP7.75□□□□□ -1.17
LRRC28-203ENST00000447360 OAZ2O95190 189 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 CPB1P15086 417 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 KCNE1P15382 129 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 ATP2B1P20020 1258 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 PDIA3P30101 505 aaKnown RBP7.75□□□□□ -1.17
LRRC28-203ENST00000447360 GBP1P32455 592 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 NAMPTP43490 491 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 ALDH1A3P47895 512 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 EFNA5P52803 228 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 CCT2P78371 535 aaKnown RBP7.75□□□□□ -1.17
LRRC28-203ENST00000447360 IRX4P78413 519 aa7.75□□□□□ -1.17
LRRC28-203ENST00000447360 SIM1P81133 766 aaPredicted RBP7.75□□□□□ -1.17
LRRC28-203ENST00000447360 DUSP4Q13115 394 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms