RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 GNPTABQ3T906 1256 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 DGKKQ5KSL6 1271 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 TANGO2Q6ICL3 276 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 MTHFD1LQ6UB35 978 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 TAS1R1Q7RTX1 841 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 SAMD3Q8N6K7 520 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 CCER1Q8TC90 406 aaPredicted RBP3.73□□□□□ -1.81
PMS1-215ENST00000447232 SEPT1Q8WYJ6 367 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 FAM46AQ96IP4 442 aaKnown RBP3.73□□□□□ -1.81
PMS1-215ENST00000447232 CEP41Q9BYV8 373 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 SEMA4CQ9C0C4 833 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 CPVLQ9H3G5 476 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 GDE1Q9NZC3 331 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 IL17BQ9UHF5 180 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 USP9YO00507 2555 aaPredicted RBP3.73□□□□□ -1.81
PMS1-215ENST00000447232 AHCTF1Q8WYP5 2266 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 TNRC6BQ9UPQ9 1833 aaKnown RBP3.73□□□□□ -1.81
PMS1-215ENST00000447232 EVPLQ92817 2033 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 A6NHS1 94 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 DHX15O43143 795 aaKnown RBP3.73□□□□□ -1.81
PMS1-215ENST00000447232 GPR32O75388 356 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 BCAR3O75815 825 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 IGLV1-40P01703 118 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 PDGFAP04085 211 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 HNRNPA1P09651 372 aaKnown RBP eCLIP3.73□□□□□ -1.81
PMS1-215ENST00000447232 CES1P23141 567 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 HOXA9P31269 272 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 SSTR4P31391 388 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 DSG1Q02413 1049 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 SP4Q02446 784 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 PPARAQ07869 468 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 LMAN2Q12907 356 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 SERINC3Q13530 473 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 QRICH1Q2TAL8 776 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 KRTAP21-3Q3LHN1 58 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 CCDC184Q52MB2 194 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 C1orf228Q6PIY5 440 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 IFNL3Q8IZI9 196 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 SYNPOQ8N3V7 929 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 RNF169Q8NCN4 708 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 MSANTD3Q96H12 275 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 OSMRQ99650 979 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 FZD8Q9H461 694 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 BRD9Q9H8M2 597 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 PCMTD2Q9NV79 361 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 VWA8A3KMH1 1905 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 PI4KAP42356 2102 aa3.73□□□□□ -1.81
PMS1-215ENST00000447232 SLC28A2O43868 658 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 FTH1P19P0C7X4 201 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 C6P13671 934 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 KCNA2P16389 499 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 POU3F2P20265 443 aaPredicted RBP3.72□□□□□ -1.81
PMS1-215ENST00000447232 ZNF76P36508 570 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 EIF1AXP47813 144 aaKnown RBP3.72□□□□□ -1.81
PMS1-215ENST00000447232 GLUD2P49448 558 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 GRM2Q14416 872 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 KARSQ15046 597 aaKnown RBP3.72□□□□□ -1.81
PMS1-215ENST00000447232 KIZQ2M2Z5 673 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 GPATCH4Q5T3I0 446 aaKnown RBP3.72□□□□□ -1.81
PMS1-215ENST00000447232 PMS2CLQ68D20 193 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 PKN3Q6P5Z2 889 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 AGMOQ6ZNB7 445 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 TMPRSS7Q7RTY8 843 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 GPR155Q7Z3F1 870 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 PALB2Q86YC2 1186 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 GPR65Q8IYL9 337 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 OSBP2Q969R2 916 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 HHIPQ96QV1 700 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 TRMT61BQ9BVS5 477 aaKnown RBP3.72□□□□□ -1.81
PMS1-215ENST00000447232 TRAIPQ9BWF2 469 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 UBA5Q9GZZ9 404 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 CHST7Q9NS84 486 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 MARCH5Q9NX47 278 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 FNIP2Q9P278 1114 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 FBXW11Q9UKB1 542 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 ITPR2Q14571 2701 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 THADAQ6YHU6 1953 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 TRABD2BA6NFA1 517 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 B4E1Z4 1266 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 PATL2C9JE40 543 aaKnown RBP3.72□□□□□ -1.81
PMS1-215ENST00000447232 H3BRJ5 948 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 DCLK1O15075 740 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 GSC2O15499 205 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 ZNF862O60290 1169 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 ATP9AO75110 1047 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 SLC3A2P08195 630 aaKnown RBP3.72□□□□□ -1.81
PMS1-215ENST00000447232 FGRP09769 529 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 CD59P13987 128 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 ZSCAN20P17040 1043 aaPredicted RBP3.72□□□□□ -1.81
PMS1-215ENST00000447232 ENGP17813 658 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 GNAT2P19087 354 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 MPSTP25325 297 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 KLRC1P26715 233 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 MZF1P28698 734 aaPredicted RBP3.72□□□□□ -1.81
PMS1-215ENST00000447232 HOXA13P31271 388 aaPredicted RBP3.72□□□□□ -1.81
PMS1-215ENST00000447232 EIF2S3P41091 472 aaKnown RBP3.72□□□□□ -1.81
PMS1-215ENST00000447232 TRIP6Q15654 476 aaKnown RBP3.72□□□□□ -1.81
PMS1-215ENST00000447232 UVSSAQ2YD98 709 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 C8orf34Q49A92 452 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 NOMO2Q5JPE7 1267 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms