RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 PITPNM3Q9BZ71 974 aa11.93□□□□□ -0.5
PTCH2-203ENST00000447098 LRRC4Q9HBW1 653 aa11.93□□□□□ -0.5
PTCH2-203ENST00000447098 SYNPO2Q9UMS6 1093 aa11.93□□□□□ -0.5
PTCH2-203ENST00000447098 AFG3L2Q9Y4W6 797 aa11.93□□□□□ -0.5
PTCH2-203ENST00000447098 SLC16A3O15427 465 aaKnown RBP11.92□□□□□ -0.5
PTCH2-203ENST00000447098 CCNE2O96020 404 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 BRAFP15056 766 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 C1orf186Q6ZWK4 172 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 DHX38Q92620 1227 aaKnown RBP11.92□□□□□ -0.5
PTCH2-203ENST00000447098 MTMR12Q9C0I1 747 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 USP54Q70EL1 1684 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 FOXN3O00409 490 aaPredicted RBP11.92□□□□□ -0.5
PTCH2-203ENST00000447098 MAGEB2O15479 319 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 PPFIA2O75334 1257 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 UPP2O95045 317 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 NPTXRO95502 500 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 HSPA6P17066 643 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 CHRNA3P32297 505 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 SNX16P57768 344 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 HADHQ16836 314 aaKnown RBP11.92□□□□□ -0.5
PTCH2-203ENST00000447098 COBLL1Q53SF7 1204 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 SPDYE1Q8NFV5 336 aaPredicted RBP11.92□□□□□ -0.5
PTCH2-203ENST00000447098 GTF3C2Q8WUA4 911 aaPredicted RBP11.92□□□□□ -0.5
PTCH2-203ENST00000447098 PGM2Q96G03 612 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 FAXDC2Q96IV6 333 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 TIPINQ9BVW5 301 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 SYNGAP1Q96PV0 1343 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 CYP3A7-CYP3A51PA0A087WV96 503 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 M0QYV0 167 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 GAS8O95995 478 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 CYP3A7P24462 503 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 ADCY8P40145 1251 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 RASSF2P50749 326 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 ATN1P54259 1190 aaPredicted RBP11.92□□□□□ -0.5
PTCH2-203ENST00000447098 FCGRTP55899 365 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 NOP14P78316 857 aaKnown RBP11.92□□□□□ -0.5
PTCH2-203ENST00000447098 PAN2Q504Q3 1202 aaKnown RBP11.92□□□□□ -0.5
PTCH2-203ENST00000447098 ARSHQ5FYA8 562 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 NT5DC3Q86UY8 548 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 CCDC89Q8N998 374 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 CLEC4DQ8WXI8 215 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 FAM49BQ9NUQ9 324 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 PLIN4Q96Q06 1357 aa11.92□□□□□ -0.5
PTCH2-203ENST00000447098 A8MXQ7 604 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 ECEL1O95672 775 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 PON1P27169 355 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 RGS7P49802 495 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 MAPK7Q13164 816 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 PPP6R3Q5H9R7 873 aaPredicted RBP11.91□□□□□ -0.5
PTCH2-203ENST00000447098 SRRM1Q8IYB3 904 aaKnown RBP11.91□□□□□ -0.5
PTCH2-203ENST00000447098 C18orf8Q96DM3 657 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 TEPSINQ96N21 525 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 PRDM5Q9NQX1 630 aaPredicted RBP11.91□□□□□ -0.5
PTCH2-203ENST00000447098 VAV3Q9UKW4 847 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 ZNF214Q9UL59 606 aaPredicted RBP11.91□□□□□ -0.5
PTCH2-203ENST00000447098 DUOX1Q9NRD9 1551 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 HUS1O60921 280 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 PGK1P00558 417 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 KRT1P04264 644 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 BRD2P25440 801 aaKnown RBP11.91□□□□□ -0.5
PTCH2-203ENST00000447098 PTENP60484 403 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 IL9RQ01113 521 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 ZBTB16Q05516 673 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 LAMTOR4Q0VGL1 99 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 SLC30A9Q6PML9 568 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 SCN4BQ8IWT1 228 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 NME8Q8N427 588 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 TMEM35BQ8NCS4 154 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 PPFIBP2Q8ND30 876 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 BEST2Q8NFU1 509 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 ATP8B4Q8TF62 1192 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 RNF25Q96BH1 459 aaPredicted RBP11.91□□□□□ -0.5
PTCH2-203ENST00000447098 NUP85Q9BW27 656 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 SEPT10Q9P0V9 454 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 ANKRD63C9JTQ0 380 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 SNX3O60493 162 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 ANKRD20A2Q5SQ80 823 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 ANKRD20A1Q5TYW2 823 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 ANKRD20A3Q5VUR7 823 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 CASC4Q6P4E1 433 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 OLFML3Q9NRN5 406 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 KLHL11Q9NVR0 708 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 TMEM59LQ9UK28 342 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 FRMPD4Q14CM0 1322 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 TGFB3P10600 412 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 KRT15P19012 456 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 HSD17B4P51659 736 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 POLE2P56282 527 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 GPC5P78333 572 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 RIPK1Q13546 671 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 ACVR2BQ13705 512 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 LENG1Q96BZ8 264 aaPredicted RBP11.91□□□□□ -0.5
PTCH2-203ENST00000447098 AGPAT1Q99943 283 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 STK33Q9BYT3 514 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 CARD9Q9H257 536 aa11.91□□□□□ -0.5
PTCH2-203ENST00000447098 MANSC4A6NHS7 340 aaPredicted RBP11.9□□□□□ -0.5
PTCH2-203ENST00000447098 PHF2O75151 1096 aa11.9□□□□□ -0.5
PTCH2-203ENST00000447098 GRAP2O75791 330 aa11.9□□□□□ -0.5
PTCH2-203ENST00000447098 MYBL1P10243 752 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms