RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SF3A3Q12874 501 aaKnown RBP eCLIP17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 JADE1Q6IE81 842 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 IFT122Q9HBG6 1241 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 IGKV6-21A0A0C4DH24 114 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 F8VP50 259 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 MTA2O94776 668 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 ZNF844Q08AG5 666 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 LDLRAD1Q5T700 205 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 DUPD1Q68J44 220 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 KIAA0319LQ8IZA0 1049 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 TAB3Q8N5C8 712 aaPredicted RBP17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 ZC3H15Q8WU90 426 aaKnown RBP17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 C2orf40Q9H1Z8 148 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 CXCL16Q9H2A7 254 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 SETD4Q9NVD3 440 aa17.86■□□□□ 0.45
LAPTM4B-201ENST00000445593 CHRNA3P32297 505 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 PTGIRP43119 386 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 CCNA1P78396 465 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 TXNRD3NBQ6F5E7 133 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 APOL6Q9BWW8 343 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 CPA4Q9UI42 421 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 HES2Q9Y543 173 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 H3BRB1 525 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 GH1P01241 217 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 MYZAPP0CAP1 466 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 IBSPP21815 317 aaPredicted RBP17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 SLC20A2Q08357 652 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 SMTNL2Q2TAL5 461 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 L3MBTL3Q96JM7 780 aaPredicted RBP17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 TUT1Q9H6E5 874 aaKnown RBP17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 KRT17Q04695 432 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 SGSM1Q2NKQ1 1148 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 DENND1BQ6P3S1 775 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 EMC1Q8N766 993 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 C1orf127Q8N9H9 656 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 FZD8Q9H461 694 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 SYNCQ9H7C4 482 aa17.85■□□□□ 0.45
LAPTM4B-201ENST00000445593 TULP2O00295 520 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 ADCY6O43306 1168 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 CELF2O95319 508 aaKnown RBP17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 ARF4P18085 180 aaPredicted RBP17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 NR1D1P20393 614 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 ADCY2Q08462 1091 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 SIX1Q15475 284 aaPredicted RBP17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 GLRA4Q5JXX5 417 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 DNAJC24Q6P3W2 148 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 ZDHHC24Q6UX98 284 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 TSHZ1Q6ZSZ6 1077 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 TWNKQ96RR1 684 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 PSD3Q9NYI0 1048 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 NOVA2Q9UNW9 492 aaKnown RBP17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 PROSCO94903 275 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 ECEL1O95672 775 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 SNAI1O95863 264 aaPredicted RBP17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 CTNNA2P26232 953 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 ASPAP45381 313 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 PHKA2P46019 1235 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 DYNLT1P63172 113 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 GPR142Q7Z601 462 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 ZNF677Q86XU0 584 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 MS4A4AQ96JQ5 239 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 RASSF4Q9H2L5 321 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 SEMA4AQ9H3S1 761 aa17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 GEMIN8Q9NWZ8 242 aaKnown RBP17.84■□□□□ 0.45
LAPTM4B-201ENST00000445593 SMPD1P17405 629 aa17.83■□□□□ 0.45
LAPTM4B-201ENST00000445593 POLR2BP30876 1174 aaKnown RBP17.83■□□□□ 0.45
LAPTM4B-201ENST00000445593 IRAK1P51617 712 aa17.83■□□□□ 0.45
LAPTM4B-201ENST00000445593 LAMC2Q13753 1193 aa17.83■□□□□ 0.45
LAPTM4B-201ENST00000445593 ZNF792Q3KQV3 632 aa17.83■□□□□ 0.45
LAPTM4B-201ENST00000445593 ZNF667Q5HYK9 610 aa17.83■□□□□ 0.45
LAPTM4B-201ENST00000445593 MREGQ8N565 214 aa17.83■□□□□ 0.45
LAPTM4B-201ENST00000445593 ATP6V1G3Q96LB4 118 aa17.83■□□□□ 0.45
LAPTM4B-201ENST00000445593 GRHL1Q9NZI5 618 aa17.83■□□□□ 0.45
LAPTM4B-201ENST00000445593 SIX4Q9UIU6 781 aa17.83■□□□□ 0.45
LAPTM4B-201ENST00000445593 MEFVO15553 781 aaPredicted RBP17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 DYNC1LI2O43237 492 aaPredicted RBP17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 ERLIN2O94905 339 aa17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 OGDHQ02218 1023 aa17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 DHX34Q14147 1143 aaKnown RBP17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 KCNT1Q5JUK3 1230 aa17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 DDX27Q96GQ7 796 aaKnown RBP17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 SDCBP2Q9H190 292 aa17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 XYLT2Q9H1B5 865 aa17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 LCMT1Q9UIC8 334 aa17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 A0A0G2JMZ2 1700 aa17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 CETPP11597 493 aa17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 ERICH1Q86X53 443 aa17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 OR6J1Q8NGC5 347 aa17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 FAM81BQ96LP2 452 aa17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 JPH2Q9BR39 696 aaPredicted RBP17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 ZWILCHQ9H900 591 aa17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 PTPRHQ9HD43 1115 aa17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 ZDHHC18Q9NUE0 388 aa17.83■□□□□ 0.44
LAPTM4B-201ENST00000445593 MAMDC4Q6UXC1 1216 aa17.82■□□□□ 0.44
LAPTM4B-201ENST00000445593 UBA3Q8TBC4 463 aa17.82■□□□□ 0.44
LAPTM4B-201ENST00000445593 FEZF2Q8TBJ5 459 aa17.82■□□□□ 0.44
LAPTM4B-201ENST00000445593 TRIM11Q96F44 468 aa17.82■□□□□ 0.44
LAPTM4B-201ENST00000445593 PTPN18Q99952 460 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms