RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 PALB2Q86YC2 1186 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 GLYCTKQ8IVS8 523 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 ZC3H3Q8IXZ2 948 aaKnown RBP11.66□□□□□ -0.54
HDAC6-211ENST00000443563 TMEM86AQ8N2M4 240 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 SMRP1Q8NCR6 262 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 VN1R2Q8NFZ6 395 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 SPATA18Q8TC71 538 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 GPT2Q8TD30 523 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 NELFBQ8WX92 580 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 SYAP1Q96A49 352 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-211ENST00000443563 HPDLQ96IR7 371 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 POP1Q99575 1024 aaKnown RBP11.66□□□□□ -0.54
HDAC6-211ENST00000443563 SFXN1Q9H9B4 322 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 METTL14Q9HCE5 456 aaKnown RBP11.66□□□□□ -0.54
HDAC6-211ENST00000443563 MAN1C1Q9NR34 630 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 GDAP2Q9NXN4 497 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 SIX4Q9UIU6 781 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 CTNND2Q9UQB3 1225 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 CDY1Q9Y6F8 540 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 GRXCR2A6NFK2 248 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 SPTLC1O15269 473 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 TBC1D4O60343 1298 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 STAU1O95793 577 aaKnown RBP11.65□□□□□ -0.54
HDAC6-211ENST00000443563 GNA14O95837 355 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 CD44P16070 742 aaKnown RBP11.65□□□□□ -0.54
HDAC6-211ENST00000443563 ELF1P32519 619 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 GTF2H1P32780 548 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 UVSSAQ2YD98 709 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 CT47A1Q5JQC4 288 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-211ENST00000443563 LIN9Q5TKA1 542 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 PTCRAQ6ISU1 281 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-211ENST00000443563 CCDC149Q6ZUS6 474 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 FILIP1Q7Z7B0 1213 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 TMEM130Q8N3G9 435 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 TOP6BLQ8N6T0 577 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 KREMEN2Q8NCW0 462 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-211ENST00000443563 ZNF461Q8TAF7 563 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 CXorf38Q8TB03 319 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 ZNF516Q92618 1163 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 BORCS6Q96GS4 357 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 RIPOR3Q96MK2 946 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 GZF1Q9H116 711 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-211ENST00000443563 ZDHHC7Q9NXF8 308 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 FBXL5Q9UKA1 691 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 TIMM13Q9Y5L4 95 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-211ENST00000443563 SNX9Q9Y5X1 595 aa11.65□□□□□ -0.54
HDAC6-211ENST00000443563 TRIM49BA6NDI0 452 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 MBTPS2O43462 519 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 CST3P01034 146 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-211ENST00000443563 C4BPAP04003 597 aaKnown RBP11.64□□□□□ -0.55
HDAC6-211ENST00000443563 FAM163BP0C2L3 166 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 P4HA1P13674 534 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 CPB1P15086 417 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 MTHFRP42898 656 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 LHX1P48742 406 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 PMS1P54277 932 aaKnown RBP11.64□□□□□ -0.55
HDAC6-211ENST00000443563 NLRP12P59046 1061 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 MCCD1P59942 119 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-211ENST00000443563 TNNC1P63316 161 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 DLG4P78352 724 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 RBM10P98175 930 aaKnown RBP11.64□□□□□ -0.55
HDAC6-211ENST00000443563 MYL7Q01449 175 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 ROR1Q01973 937 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 SMARCB1Q12824 385 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 NCOA4Q13772 614 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 CLUL1Q15846 466 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 SGSM1Q2NKQ1 1148 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 ZACNQ401N2 412 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 CCDC183Q5T5S1 534 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 TDRD10Q5VZ19 366 aaKnown RBP11.64□□□□□ -0.55
HDAC6-211ENST00000443563 TTI2Q6NXR4 508 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 SYCE2Q6PIF2 218 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 C15orf39Q6ZRI6 1047 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 FRMD5Q7Z6J6 570 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 CCDC150Q8NCX0 1101 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 CMASQ8NFW8 434 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-211ENST00000443563 PLEKHO2Q8TD55 490 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 TAF4BQ92750 862 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 NECTIN4Q96NY8 510 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 RHOBTB2Q9BYZ6 727 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 IMPG2Q9BZV3 1241 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 ADAM7Q9H2U9 754 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 VRTNQ9H8Y1 702 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 TMEM8AQ9HCN3 771 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 ARMCX3Q9UH62 379 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-211ENST00000443563 RWDD2AQ9UIY3 292 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 FBXW11Q9UKB1 542 aa11.64□□□□□ -0.55
HDAC6-211ENST00000443563 ADAM12O43184 909 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 ABLIM3O94929 683 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 CLSTN1O94985 981 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 HNRNPA1P09651 372 aaKnown RBP eCLIP11.63□□□□□ -0.55
HDAC6-211ENST00000443563 BMP1P13497 986 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 ATF2P15336 505 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 HOXA9P31269 272 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 PIK3CAP42336 1068 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 KCNQ1P51787 676 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 ARPP19P56211 112 aa11.63□□□□□ -0.55
HDAC6-211ENST00000443563 SMAD2Q15796 467 aaKnown RBP11.63□□□□□ -0.55
HDAC6-211ENST00000443563 TPD52L1Q16890 204 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms