RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 KLRC4O43908 158 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 VIL1P09327 827 aaKnown RBP23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 MYBPC2Q14324 1141 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 IL17AQ16552 155 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 RAPGEF5Q92565 580 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 SDCCAG3Q96C92 435 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 SERPINI1Q99574 410 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 EFHD1Q9BUP0 239 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 TLR10Q9BXR5 811 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 ARL2BPQ9Y2Y0 163 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 GAS2O43903 313 aaKnown RBP23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 CENPCQ03188 943 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 CYP24A1Q07973 514 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 C15orf52Q6ZUT6 534 aaKnown RBP23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 POLIQ9UNA4 740 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 FAM47DPA6NHR8 397 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 HSD17B4P51659 736 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 FUT2Q10981 343 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 PLEKHA5Q9HAU0 1116 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 PCDHAC2Q9Y5I4 1007 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 GLRA4Q5JXX5 417 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 IFT43Q96FT9 208 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 PSMC3IPQ9P2W1 217 aaPredicted RBP23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 ANGPTL2Q9UKU9 493 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 ZSCAN5CA6NGD5 496 aaPredicted RBP23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 GPD1P21695 349 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 PRAMEP78395 509 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 KDELC2Q7Z4H8 507 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 URGCPQ8TCY9 931 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 ACTRT1Q8TDG2 376 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 SPDL1Q96EA4 605 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 MYCBPQ99417 103 aaPredicted RBP23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 PARK7Q99497 189 aaKnown RBP23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 CCDC78A2IDD5 438 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 KRT10P13645 584 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 CPB1P15086 417 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 MEA1Q16626 185 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 SAMD3Q8N6K7 520 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 SLC5A5Q92911 643 aa23.54■■□□□ 1.36
CTDSPL-206ENST00000443503 DFFAO00273 331 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 AGR3Q8TD06 166 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 ELMO3Q96BJ8 720 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 SGSM3Q96HU1 749 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 MED15Q96RN5 788 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 ROPN1BQ9BZX4 212 aaPredicted RBP23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 ROPN1Q9HAT0 212 aaPredicted RBP23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 LRRC4BQ9NT99 713 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 USP20Q9Y2K6 914 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 NPTXRO95502 500 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 CD4P01730 458 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 APOEP02649 317 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 BIRC2Q13490 618 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 RASSF3Q86WH2 238 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 TATDN2Q93075 761 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 H3BQF6 201 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 FBXO16Q8IX29 292 aaPredicted RBP23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 FAM71DQ8N9W8 422 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 PDZD8Q8NEN9 1154 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 SP110Q9HB58 689 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 A0A0U1RQJ8 604 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 KDM4FA0A1W2PPD8 638 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 ZC3H11AO75152 810 aaKnown RBP eCLIP23.53■■□□□ 1.364e-7■□□□□ 8
CTDSPL-206ENST00000443503 ITGA4P13612 1032 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 DCAF6Q58WW2 860 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 FSCBQ5H9T9 825 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 RNF135Q8IUD6 432 aa23.53■■□□□ 1.36
CTDSPL-206ENST00000443503 CHEK2O96017 543 aa23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 SLC12A3P55017 1021 aa23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 KCNT1Q5JUK3 1230 aa23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 ERO1BQ86YB8 467 aa23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 USP15Q9Y4E8 981 aaPredicted RBP23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 CASP5P51878 434 aa23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 GOLGA7BQ2TAP0 167 aa23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 SEC16BQ96JE7 1060 aa23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 MAGEB5Q9BZ81 275 aa23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 FAM96AQ9H5X1 160 aa23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 ACAD11Q709F0 780 aa23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 TTC8Q8TAM2 541 aa23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 HDAC7Q8WUI4 952 aa23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 N4BP2L2Q92802 583 aaPredicted RBP23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 UBR1Q8IWV7 1749 aa23.52■■□□□ 1.36
CTDSPL-206ENST00000443503 A0A0A6YYK5 440 aaPredicted RBP23.52■■□□□ 1.35
CTDSPL-206ENST00000443503 DGKDQ16760 1214 aa23.52■■□□□ 1.35
CTDSPL-206ENST00000443503 KCNV2Q8TDN2 545 aa23.52■■□□□ 1.35
CTDSPL-206ENST00000443503 MKL1Q969V6 931 aa23.52■■□□□ 1.35
CTDSPL-206ENST00000443503 CLMNQ96JQ2 1002 aa23.52■■□□□ 1.35
CTDSPL-206ENST00000443503 PAK5Q9P286 719 aa23.52■■□□□ 1.35
CTDSPL-206ENST00000443503 FRMPD4Q14CM0 1322 aa23.51■■□□□ 1.35
CTDSPL-206ENST00000443503 VWA5AO00534 786 aa23.51■■□□□ 1.35
CTDSPL-206ENST00000443503 CSDE1O75534 798 aaKnown RBP23.51■■□□□ 1.35
CTDSPL-206ENST00000443503 MAP3K6O95382 1288 aa23.51■■□□□ 1.35
CTDSPL-206ENST00000443503 ZNF200P98182 395 aaPredicted RBP23.51■■□□□ 1.35
CTDSPL-206ENST00000443503 DEUP1Q05D60 604 aa23.51■■□□□ 1.35
CTDSPL-206ENST00000443503 FAM161BQ96MY7 647 aa23.51■■□□□ 1.35
CTDSPL-206ENST00000443503 SIK3Q9Y2K2 1263 aa23.51■■□□□ 1.35
CTDSPL-206ENST00000443503 DDX3XO00571 662 aaKnown RBP eCLIP23.51■■□□□ 1.351e-6■■■■□ 19.6
CTDSPL-206ENST00000443503 MYL6P60660 151 aa23.51■■□□□ 1.35
CTDSPL-206ENST00000443503 C1orf146Q5VVC0 180 aa23.51■■□□□ 1.35
CTDSPL-206ENST00000443503 MEIS2O14770 477 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms