RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 LRPAP1P30533 357 aa22.25■■□□□ 1.15
TMEM50B-204ENST00000442441 CTHP32929 405 aa22.25■■□□□ 1.15
TMEM50B-204ENST00000442441 ALDH1A3P47895 512 aa22.25■■□□□ 1.15
TMEM50B-204ENST00000442441 USP37Q86T82 979 aa22.25■■□□□ 1.15
TMEM50B-204ENST00000442441 FAM200AQ8TCP9 573 aa22.25■■□□□ 1.15
TMEM50B-204ENST00000442441 SPIRE2Q8WWL2 714 aa22.25■■□□□ 1.15
TMEM50B-204ENST00000442441 TIPINQ9BVW5 301 aa22.25■■□□□ 1.15
TMEM50B-204ENST00000442441 PLEKHA5Q9HAU0 1116 aa22.25■■□□□ 1.15
TMEM50B-204ENST00000442441 C2orf42Q9NWW7 574 aa22.25■■□□□ 1.15
TMEM50B-204ENST00000442441 KCNG1Q9UIX4 513 aa22.25■■□□□ 1.15
TMEM50B-204ENST00000442441 ZFHX4Q86UP3 3567 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 CHD6Q8TD26 2715 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 PP2D1A8MPX8 630 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 CLDN3O15551 220 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 GUCY2CP25092 1073 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 HOXA6P31267 233 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 AARSP49588 968 aaKnown RBP eCLIP22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 SPAG1Q07617 926 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 MCL1Q07820 350 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 ARHGAP29Q52LW3 1261 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 CENPPQ6IPU0 288 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 ZPBP2Q6X784 338 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 CEP68Q76N32 757 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 KCNK18Q7Z418 384 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 FAM160A2Q8N612 972 aaPredicted RBP22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 TMEM161BQ8NDZ6 487 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 TTC8Q8TAM2 541 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 KIF12Q96FN5 646 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 LRRC3BQ96PB8 259 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 LLPHQ9BRT6 129 aaKnown RBP22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 MKNK1Q9BUB5 465 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 GTSE1Q9NYZ3 720 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 SLC27A5Q9Y2P5 690 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 ASB3Q9Y575 518 aa22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.24■■□□□ 1.15
TMEM50B-204ENST00000442441 TTC26A0AVF1 554 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 DPYSL4O14531 572 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 CLTAP09496 248 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 MAPTP10636 758 aaKnown RBP22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 CYP3A5P20815 502 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 SMTNP53814 917 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 ZBTB6Q15916 424 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 DSTYKQ6XUX3 929 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 GAREM2Q75VX8 874 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 HAUS6Q7Z4H7 955 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 DNAJB7Q7Z6W7 309 aaPredicted RBP22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 CCDC83Q8IWF9 413 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 SYNPOQ8N3V7 929 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 DDX1Q92499 740 aaKnown RBP22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 PSMG2Q969U7 264 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 CHAMP1Q96JM3 812 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 ZFYVE19Q96K21 471 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 OBP2AQ9NY56 170 aa22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 UBQLN1Q9UMX0 589 aaKnown RBP22.23■■□□□ 1.15
TMEM50B-204ENST00000442441 FGF19O95750 216 aa22.22■■□□□ 1.15
TMEM50B-204ENST00000442441 PLS3P13797 630 aa22.22■■□□□ 1.15
TMEM50B-204ENST00000442441 CDC25AP30304 524 aa22.22■■□□□ 1.15
TMEM50B-204ENST00000442441 RAD51AP2Q09MP3 1159 aa22.22■■□□□ 1.15
TMEM50B-204ENST00000442441 CCINQ13939 588 aa22.22■■□□□ 1.15
TMEM50B-204ENST00000442441 MYBPC2Q14324 1141 aa22.22■■□□□ 1.15
TMEM50B-204ENST00000442441 PON2Q15165 354 aa22.22■■□□□ 1.15
TMEM50B-204ENST00000442441 OVOS1Q6IE37 1185 aa22.22■■□□□ 1.15
TMEM50B-204ENST00000442441 WDR5BQ86VZ2 330 aa22.22■■□□□ 1.15
TMEM50B-204ENST00000442441 ATAD1Q8NBU5 361 aa22.22■■□□□ 1.15
TMEM50B-204ENST00000442441 ATXN3LQ9H3M9 355 aa22.22■■□□□ 1.15
TMEM50B-204ENST00000442441 SDK1Q7Z5N4 2213 aa22.22■■□□□ 1.15
TMEM50B-204ENST00000442441 CFAP47Q6ZTR5 3102 aa22.22■■□□□ 1.15
TMEM50B-204ENST00000442441 MTMR11A4FU01 709 aa22.21■■□□□ 1.15
TMEM50B-204ENST00000442441 TYMPP19971 482 aa22.21■■□□□ 1.15
TMEM50B-204ENST00000442441 HOXC13P31276 330 aa22.21■■□□□ 1.15
TMEM50B-204ENST00000442441 MATR3P43243 847 aaKnown RBP eCLIP22.21■■□□□ 1.152e-7■■■□□ 15.3
TMEM50B-204ENST00000442441 TOB1P50616 345 aaPredicted RBP22.21■■□□□ 1.15
TMEM50B-204ENST00000442441 IL17AQ16552 155 aa22.21■■□□□ 1.15
TMEM50B-204ENST00000442441 ARHGAP15Q53QZ3 475 aa22.21■■□□□ 1.15
TMEM50B-204ENST00000442441 GPR158Q5T848 1215 aa22.21■■□□□ 1.15
TMEM50B-204ENST00000442441 MMTAG2Q9BU76 263 aaKnown RBP22.21■■□□□ 1.15
TMEM50B-204ENST00000442441 HAPLN2Q9GZV7 340 aa22.21■■□□□ 1.15
TMEM50B-204ENST00000442441 LIMCH1Q9UPQ0 1083 aa22.21■■□□□ 1.15
TMEM50B-204ENST00000442441 PCDHB6Q9Y5E3 794 aa22.21■■□□□ 1.15
TMEM50B-204ENST00000442441 NUP210Q8TEM1 1887 aaPredicted RBP22.21■■□□□ 1.15
TMEM50B-204ENST00000442441 LAD1O00515 517 aa22.2■■□□□ 1.14
TMEM50B-204ENST00000442441 GABRR2P28476 465 aa22.2■■□□□ 1.14
TMEM50B-204ENST00000442441 WEE1P30291 646 aa22.2■■□□□ 1.14
TMEM50B-204ENST00000442441 PLCB2Q00722 1185 aa22.2■■□□□ 1.14
TMEM50B-204ENST00000442441 PPP2R3AQ06190 1150 aa22.2■■□□□ 1.14
TMEM50B-204ENST00000442441 IL31Q6EBC2 164 aa22.2■■□□□ 1.14
TMEM50B-204ENST00000442441 ITIH5Q86UX2 942 aa22.2■■□□□ 1.14
TMEM50B-204ENST00000442441 TTC9BQ8N6N2 239 aa22.2■■□□□ 1.14
TMEM50B-204ENST00000442441 BPIFB1Q8TDL5 484 aa22.2■■□□□ 1.14
TMEM50B-204ENST00000442441 HSFX1Q9UBD0 423 aa22.2■■□□□ 1.14
TMEM50B-204ENST00000442441 LACTBL1A8MY62 500 aa22.19■■□□□ 1.14
TMEM50B-204ENST00000442441 XPOTO43592 962 aaKnown RBP22.19■■□□□ 1.14
TMEM50B-204ENST00000442441 SOAT2O75908 522 aa22.19■■□□□ 1.14
TMEM50B-204ENST00000442441 PRAMEF12O95522 483 aa22.19■■□□□ 1.14
TMEM50B-204ENST00000442441 KCNA4P22459 653 aa22.19■■□□□ 1.14
TMEM50B-204ENST00000442441 U2AF2P26368 475 aaKnown RBP eCLIP22.19■■□□□ 1.142e-8■■□□□ 12.1
TMEM50B-204ENST00000442441 PRPHP41219 470 aa22.19■■□□□ 1.14
TMEM50B-204ENST00000442441 TNFSF9P41273 254 aa22.19■■□□□ 1.14
TMEM50B-204ENST00000442441 GUCY2FP51841 1108 aa22.19■■□□□ 1.14
TMEM50B-204ENST00000442441 LIMK1P53667 647 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms