RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 UMODL1Q5DID0 1318 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 SGPL1O95470 568 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 ABL1P00519 1130 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 AKAP5P24588 427 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 ATICP31939 592 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 MNAT1P51948 309 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 PAK2Q13177 524 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 ERCC6LQ2NKX8 1250 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 ZNF667Q5HYK9 610 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 SCARA3Q6AZY7 606 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 U2AF1L4Q8WU68 220 aaKnown RBP8.63□□□□□ -1.03
CCDC39-201ENST00000442201 SUDS3Q9H7L9 328 aaPredicted RBP8.63□□□□□ -1.03
CCDC39-201ENST00000442201 DPP3Q9NY33 737 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 CNTN3Q9P232 1028 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 PADI3Q9ULW8 664 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 SQORQ9Y6N5 450 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 PJA2O43164 708 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 XPOTO43592 962 aaKnown RBP8.63□□□□□ -1.03
CCDC39-201ENST00000442201 CYP11B1P15538 503 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 ACO1P21399 889 aaKnown RBP8.63□□□□□ -1.03
CCDC39-201ENST00000442201 POLR2BP30876 1174 aaKnown RBP8.63□□□□□ -1.03
CCDC39-201ENST00000442201 CD52P31358 61 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 LMAN1P49257 510 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 RBP5P82980 135 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 PREPLQ4J6C6 727 aaPredicted RBP8.63□□□□□ -1.03
CCDC39-201ENST00000442201 ZNF569Q5MCW4 686 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 ZNF618Q5T7W0 954 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 WLSQ5T9L3 541 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 FOXR1Q6PIV2 292 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 TRIM74Q86UV6 250 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 TRIM73Q86UV7 250 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 SLC47A2Q86VL8 602 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 BEST2Q8NFU1 509 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 SLC30A5Q8TAD4 765 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 LNX1Q8TBB1 728 aaPredicted RBP8.63□□□□□ -1.03
CCDC39-201ENST00000442201 ERVK-5Q9HDB9 667 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 FAM105AQ9NUU6 356 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 NXF1Q9UBU9 619 aaKnown RBP8.63□□□□□ -1.03
CCDC39-201ENST00000442201 OGDHLQ9ULD0 1010 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 AGAP1Q9UPQ3 857 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 PCDHB4Q9Y5E5 795 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 PCDHB2Q9Y5E7 798 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 PCDHGA4Q9Y5G9 962 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 H2AFZP0C0S5 128 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 CKBP12277 381 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 CCNHP51946 323 aaPredicted RBP8.62□□□□□ -1.03
CCDC39-201ENST00000442201 YWHAEP62258 255 aaKnown RBP8.62□□□□□ -1.03
CCDC39-201ENST00000442201 LPIN1Q14693 890 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 WDR72Q3MJ13 1102 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 SMYD5Q6GMV2 418 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 TMEM270Q6UE05 265 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 ALKAL1Q6UXT8 129 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 H2AFVQ71UI9 128 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 NOP9Q86U38 636 aaKnown RBP8.62□□□□□ -1.03
CCDC39-201ENST00000442201 SMG8Q8ND04 991 aaKnown RBP8.62□□□□□ -1.03
CCDC39-201ENST00000442201 SLC20A1Q8WUM9 679 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 ZMAT2Q96NC0 199 aaKnown RBP8.62□□□□□ -1.03
CCDC39-201ENST00000442201 RNF39Q9H2S5 420 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 VRTNQ9H8Y1 702 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 NOCTQ9UK39 431 aaKnown RBP8.62□□□□□ -1.03
CCDC39-201ENST00000442201 UBQLN1Q9UMX0 589 aaKnown RBP8.62□□□□□ -1.03
CCDC39-201ENST00000442201 TRIP12Q14669 1992 aaPredicted RBP8.62□□□□□ -1.03
CCDC39-201ENST00000442201 MACROD2A1Z1Q3 448 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 P4HA1P13674 534 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 GUCY2FP51841 1108 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 ZBTB6Q15916 424 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 GLRA4Q5JXX5 417 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 CTU1Q7Z7A3 348 aaKnown RBP8.62□□□□□ -1.03
CCDC39-201ENST00000442201 RPUSD2Q8IZ73 545 aaKnown RBP8.62□□□□□ -1.03
CCDC39-201ENST00000442201 DNAJC5GQ8N7S2 189 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 ARMC2Q8NEN0 867 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 CXorf38Q8TB03 319 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 HPDLQ96IR7 371 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 WDR24Q96S15 920 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 ACP6Q9NPH0 428 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 KLK14Q9P0G3 267 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 NENFQ9UMX5 172 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 CNTN6Q9UQ52 1028 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 DUSP10Q9Y6W6 482 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 SMIM28A0A1B0GU29 152 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 KCNE1P15382 129 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 CDK7P50613 346 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 CDR2Q01850 454 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 MYO1EQ12965 1108 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 XKR4Q5GH76 650 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 ZNF677Q86XU0 584 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 MICALL1Q8N3F8 863 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 RBBP8NLQ8NC74 664 aaPredicted RBP8.62□□□□□ -1.03
CCDC39-201ENST00000442201 OLIG1Q8TAK6 271 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 CAGE1Q8TC20 777 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 CISHQ9NSE2 258 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 INTUQ9ULD6 942 aa8.62□□□□□ -1.03
CCDC39-201ENST00000442201 TLR3O15455 904 aaKnown RBP8.61□□□□□ -1.03
CCDC39-201ENST00000442201 SNUPNO95149 360 aaKnown RBP8.61□□□□□ -1.03
CCDC39-201ENST00000442201 STAU1O95793 577 aaKnown RBP8.61□□□□□ -1.03
CCDC39-201ENST00000442201 CD4P01730 458 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 WEE2P0C1S8 567 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 ITGA4P13612 1032 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 CD58P19256 250 aa8.61□□□□□ -1.03
CCDC39-201ENST00000442201 ASPAP45381 313 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms