RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 CDC14BO60729 498 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 H2AFYO75367 372 aaKnown RBP4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 KNG1P01042 644 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 ITGAVP06756 1048 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 ADRB2P07550 413 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 KRT10P13645 584 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 ENPP1P22413 925 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 IL4RP24394 825 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 PDIA3P30101 505 aaKnown RBP4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 TECP42680 631 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 RRADP55042 308 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 GALNT1Q10472 559 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 TMED1Q13445 227 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 SETMARQ53H47 684 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 FAM209BQ5JX69 171 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 METTL24Q5JXM2 366 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 RNF220Q5VTB9 566 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 IRGCQ6NXR0 463 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 SLC30A6Q6NXT4 461 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 RPUSD3Q6P087 351 aaKnown RBP4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 ABHD17CQ6PCB6 329 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 DARS2Q6PI48 645 aaKnown RBP4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 FAM47EQ6ZV65 393 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 POLNQ7Z5Q5 900 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 LRRTM4Q86VH4 590 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZNF227Q86WZ6 799 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 PROSER1Q86XN7 944 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 GRAMD1CQ8IYS0 662 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 FAM89AQ96GI7 184 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 RBM18Q96H35 190 aaKnown RBP4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 MAGEB10Q96LZ2 347 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 MOGAT1Q96PD6 335 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 SLF1Q9BQI6 1058 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 TACO1Q9BSH4 297 aaKnown RBP4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 GHITMQ9H3K2 345 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 MMRN2Q9H8L6 949 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 IRAK4Q9NWZ3 460 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 RAI14Q9P0K7 980 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 SAMD15Q9P1V8 674 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 TBC1D29Q9UFV1 150 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 SLC13A4Q9UKG4 626 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 DENND2AQ9ULE3 1009 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 KNSTRNQ9Y448 316 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 PCDHGB2Q9Y5G2 931 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 BLACEA4D250 179 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 PGPEP1LA6NFU8 196 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 PI4K2BG5E9Z4 385 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 ELL2O00472 640 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 SLC7A4O43246 635 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 B3GALT2O43825 422 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 KIF5CO60282 957 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 RAD17O75943 681 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 GLRX3O76003 335 aaKnown RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 URI1O94763 535 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 GOSR1O95249 250 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 TGDSO95455 350 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 APOA4P06727 396 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 PARP1P09874 1014 aaKnown RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 MYCLP12524 364 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 P4HA1P13674 534 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 HNRNPLP14866 589 aaKnown RBP eCLIP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 STMN1P16949 149 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 CR2P20023 1033 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 LMO1P25800 156 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 ACTN2P35609 894 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 PHKA1P46020 1223 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZNF143P52747 638 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 LIMK1P53667 647 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 MAPK10P53779 464 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 CSE1LP55060 971 aaKnown RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 SESN3P58005 492 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 TUBA3CQ13748 450 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 PRKG1Q13976 671 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 BECN1Q14457 450 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 KRT32Q14532 448 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 NOLC1Q14978 699 aaKnown RBP eCLIP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 SART3Q15020 963 aaKnown RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 SF1Q15637 639 aaKnown RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 HSP90B2PQ58FF3 399 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZNF362Q5T0B9 420 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 KAZNQ674X7 775 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 DPY19L2P1Q6NXN4 242 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 PGBD2Q6P3X8 592 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 TUBA3EQ6PEY2 450 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 CNSTQ6PJW8 725 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 LMBR1LQ6UX01 489 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 KRT74Q7RTS7 529 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 DNAJB7Q7Z6W7 309 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 REXO1L1PQ8IX06 675 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 IQCF2Q8IXL9 164 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 CMIPQ8IY22 773 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 PIP4K2CQ8TBX8 421 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 SPATA18Q8TC71 538 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 JADE3Q92613 823 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 TMEM41AQ96HV5 264 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 DPYSL5Q9BPU6 564 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 POLR3CQ9BUI4 534 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 JAM3Q9BX67 310 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 B3GNT5Q9BYG0 378 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms