RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 C4orf32Q8N8J7 132 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 LEMD2Q8NC56 503 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 C3orf58Q8NDZ4 430 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 ATRIPQ8WXE1 791 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 SECISBP2LQ93073 1101 aaKnown RBP8.46□□□□□ -1.06
VPS50-204ENST00000438395 MCRS1Q96EZ8 462 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 CALML4Q96GE6 196 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 NELL2Q99435 816 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 CXCL16Q9H2A7 254 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 BRD9Q9H8M2 597 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 ASAH2Q9NR71 780 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 KCND2Q9NZV8 630 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 CNTN3Q9P232 1028 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 LARSQ9P2J5 1176 aaKnown RBP8.46□□□□□ -1.06
VPS50-204ENST00000438395 DNMT3BQ9UBC3 853 aaKnown RBP8.46□□□□□ -1.06
VPS50-204ENST00000438395 INSL5Q9Y5Q6 135 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 CEP250Q9BV73 2442 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 CACNA1AO00555 2505 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 USP34Q70CQ2 3546 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 NCOR2Q9Y618 2525 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 PLXNA3P51805 1871 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 C2orf16Q68DN1 1984 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 ARHGEF37A1IGU5 675 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 FAM170BA6NMN3 283 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 TBCAO75347 108 aaKnown RBP8.45□□□□□ -1.06
VPS50-204ENST00000438395 FAM13AO94988 1023 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 BMP15O95972 392 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 CENPBP07199 599 aaPredicted RBP8.45□□□□□ -1.06
VPS50-204ENST00000438395 SP9P0CG40 484 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 MYL4P12829 197 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 ATF2P15336 505 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 CEBPBP17676 345 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 SCP2P22307 547 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 UBA7P41226 1012 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 ID4P47928 161 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 TOB1P50616 345 aaPredicted RBP8.45□□□□□ -1.06
VPS50-204ENST00000438395 ATP2C1P98194 919 aaPredicted RBP8.45□□□□□ -1.06
VPS50-204ENST00000438395 YWHAHQ04917 246 aaPredicted RBP8.45□□□□□ -1.06
VPS50-204ENST00000438395 SOX4Q06945 474 aaPredicted RBP8.45□□□□□ -1.06
VPS50-204ENST00000438395 ADCY1Q08828 1119 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 PLD1Q13393 1074 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 PPP2R5DQ14738 602 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 ARID5BQ14865 1188 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 XKR4Q5GH76 650 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 ZNF852Q6ZMS4 543 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 C1orf186Q6ZWK4 172 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 ERMP1Q7Z2K6 904 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 GPBP1Q86WP2 473 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 YAF2Q8IY57 180 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 TCEAL8Q8IYN2 117 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 RUBCNQ92622 972 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 DNASE1L2Q92874 299 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 C18orf25Q96B23 403 aaPredicted RBP8.45□□□□□ -1.06
VPS50-204ENST00000438395 SUSD3Q96L08 255 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 ZNF512Q96ME7 567 aaPredicted RBP8.45□□□□□ -1.06
VPS50-204ENST00000438395 TBC1D32Q96NH3 1257 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 PLIN2Q99541 437 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 RPP25Q9BUL9 199 aaKnown RBP8.45□□□□□ -1.06
VPS50-204ENST00000438395 OSBPL6Q9BZF3 934 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 ZHX3Q9H4I2 956 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 ZFP14Q9HCL3 533 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 PTPRHQ9HD43 1115 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 NCDNQ9UBB6 729 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 FBXL5Q9UKA1 691 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 MAFFQ9ULX9 164 aa8.45□□□□□ -1.06
VPS50-204ENST00000438395 WDR27A2RRH5 827 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 K7ENM7 598 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 MAN2B1O00754 1011 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 PLA2G4BP0C869 781 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 CXCL8P10145 99 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 MAPTP10636 758 aaKnown RBP8.44□□□□□ -1.06
VPS50-204ENST00000438395 PROZP22891 400 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 VARSP26640 1264 aaKnown RBP8.44□□□□□ -1.06
VPS50-204ENST00000438395 ABCD1P33897 745 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 CSTF1Q05048 431 aaKnown RBP8.44□□□□□ -1.06
VPS50-204ENST00000438395 MCL1Q07820 350 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 MAPK7Q13164 816 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 DHX8Q14562 1220 aaKnown RBP8.44□□□□□ -1.06
VPS50-204ENST00000438395 AGERQ15109 404 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 SLC5A9Q2M3M2 681 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 SEZ6Q53EL9 994 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 ARL6IP4Q66PJ3 421 aaKnown RBP8.44□□□□□ -1.06
VPS50-204ENST00000438395 ARMCX5Q6P1M9 558 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 ALKAL1Q6UXT8 129 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 DSTYKQ6XUX3 929 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 TAS1R3Q7RTX0 852 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 KCNK18Q7Z418 384 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 KIAA2013Q8IYS2 634 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 TMEM161BQ8NDZ6 487 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 FAM200AQ8TCP9 573 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 IRF7Q92985 503 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 ELSPBP1Q96BH3 223 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 AK8Q96MA6 479 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 ZMAT2Q96NC0 199 aaKnown RBP8.44□□□□□ -1.06
VPS50-204ENST00000438395 TRMT61BQ9BVS5 477 aaKnown RBP8.44□□□□□ -1.06
VPS50-204ENST00000438395 OXCT2Q9BYC2 517 aaPredicted RBP8.44□□□□□ -1.06
VPS50-204ENST00000438395 RPF1Q9H9Y2 349 aaKnown RBP8.44□□□□□ -1.06
VPS50-204ENST00000438395 PLEKHA5Q9HAU0 1116 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 LTB4R2Q9NPC1 389 aa8.44□□□□□ -1.06
VPS50-204ENST00000438395 AVENQ9NQS1 362 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms