RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 ODF2LQ9ULJ1 636 aa8.44□□□□□ -1.06
VPS50-203ENST00000436177 UBQLN1Q9UMX0 589 aaKnown RBP8.44□□□□□ -1.06
VPS50-203ENST00000436177 SMC3Q9UQE7 1217 aa8.44□□□□□ -1.06
VPS50-203ENST00000436177 OTOGLQ3ZCN5 2332 aa8.44□□□□□ -1.06
VPS50-203ENST00000436177 DOCK8Q8NF50 2099 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 OR6C75A6NL08 312 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 TULP1O00294 542 aaPredicted RBP8.43□□□□□ -1.06
VPS50-203ENST00000436177 SLC26A4O43511 780 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 LRRN2O75325 713 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 MICAL2O94851 1124 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 ABLIM3O94929 683 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 ODC1P11926 461 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 CD72P21854 359 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 IGFBP6P24592 240 aaPredicted RBP8.43□□□□□ -1.06
VPS50-203ENST00000436177 ALDH1A3P47895 512 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 MCM2P49736 904 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 EPHB3P54753 998 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 TWF1Q12792 350 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 GRM2Q14416 872 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 TAF12Q16514 161 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 ZNF528Q3MIS6 628 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 FAM78AQ5JUQ0 283 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 HAUS6Q7Z4H7 955 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 MYCT1Q8N699 235 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 SYT2Q8N9I0 419 aaPredicted RBP8.43□□□□□ -1.06
VPS50-203ENST00000436177 BEST2Q8NFU1 509 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 DEPDC1BQ8WUY9 529 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 SMARCD2Q92925 531 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 E2F7Q96AV8 911 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 ZBTB45Q96K62 511 aaPredicted RBP8.43□□□□□ -1.06
VPS50-203ENST00000436177 GCNAQ96QF7 691 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 NTPCRQ9BSD7 190 aaKnown RBP8.43□□□□□ -1.06
VPS50-203ENST00000436177 MMTAG2Q9BU76 263 aaKnown RBP8.43□□□□□ -1.06
VPS50-203ENST00000436177 MSTO1Q9BUK6 570 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 DDX23Q9BUQ8 820 aaKnown RBP8.43□□□□□ -1.06
VPS50-203ENST00000436177 PARVGQ9HBI0 331 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 HEBP1Q9NRV9 189 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 DLGAP2Q9P1A6 1054 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 RAB23Q9ULC3 237 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 NDRG2Q9UN36 371 aaKnown RBP8.43□□□□□ -1.06
VPS50-203ENST00000436177 YIPF1Q9Y548 306 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.43□□□□□ -1.06
VPS50-203ENST00000436177 PCDHGA2Q9Y5H1 932 aa8.43□□□□□ -1.06
VPS50-203ENST00000436177 F5P12259 2224 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 ABLIM1O14639 778 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 ZNF263O14978 683 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 OGTO15294 1046 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 SEC24AO95486 1093 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 FGF19O95750 216 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 S1PR4O95977 384 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 GLULP15104 373 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 PSMC3P17980 439 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 PAX3P23760 479 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 TARSP26639 723 aaKnown RBP8.42□□□□□ -1.06
VPS50-203ENST00000436177 GJB2P29033 226 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 GDI1P31150 447 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 RPS9P46781 194 aaKnown RBP8.42□□□□□ -1.06
VPS50-203ENST00000436177 KPNA1P52294 538 aaPredicted RBP8.42□□□□□ -1.06
VPS50-203ENST00000436177 SLC12A3P55017 1021 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 NCKAP1LP55160 1127 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 SPAG1Q07617 926 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 VEPH1Q14D04 833 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 IL17AQ16552 155 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 SLC10A6Q3KNW5 377 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 TMEM119Q4V9L6 283 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 ARHGAP15Q53QZ3 475 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 HYIQ5T013 277 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 TANGO2Q6ICL3 276 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 OVOS1Q6IE37 1185 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 CD300LGQ6UXG3 332 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 DGLUCYQ7Z3D6 616 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 ITIH5Q86UX2 942 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 KRI1Q8N9T8 703 aaKnown RBP8.42□□□□□ -1.06
VPS50-203ENST00000436177 ZSCAN18Q8TBC5 510 aaPredicted RBP8.42□□□□□ -1.06
VPS50-203ENST00000436177 KCNV2Q8TDN2 545 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 CSGALNACT1Q8TDX6 532 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 TCEAL4Q96EI5 215 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 BORCS6Q96GS4 357 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 TMX3Q96JJ7 454 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 ASB16Q96NS5 453 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 PGLYRP2Q96PD5 576 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 TSPAN18Q96SJ8 248 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 REEP2Q9BRK0 252 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 IER2Q9BTL4 223 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 GPR88Q9GZN0 384 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 ZSCAN32Q9NX65 697 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 GMEB2Q9UKD1 530 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 SMG5Q9UPR3 1016 aaKnown RBP8.42□□□□□ -1.06
VPS50-203ENST00000436177 TIMM13Q9Y5L4 95 aaPredicted RBP8.42□□□□□ -1.06
VPS50-203ENST00000436177 PIAS3Q9Y6X2 628 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 SPTBN2O15020 2390 aa8.42□□□□□ -1.06
VPS50-203ENST00000436177 NPHP3-ACAD11A0A0J9YXS1 232 aa8.41□□□□□ -1.06
VPS50-203ENST00000436177 TTC26A0AVF1 554 aa8.41□□□□□ -1.06
VPS50-203ENST00000436177 VPS37CA5D8V6 355 aaPredicted RBP8.41□□□□□ -1.06
VPS50-203ENST00000436177 RCCD1A6NED2 376 aa8.41□□□□□ -1.06
VPS50-203ENST00000436177 LACTBL1A8MY62 500 aa8.41□□□□□ -1.06
VPS50-203ENST00000436177 M0QZQ0 153 aa8.41□□□□□ -1.06
VPS50-203ENST00000436177 TBC1D4O60343 1298 aa8.41□□□□□ -1.06
VPS50-203ENST00000436177 OAZ2O95190 189 aa8.41□□□□□ -1.06
VPS50-203ENST00000436177 CYP3A5P20815 502 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms