RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 TBX20Q9UMR3 447 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 KIF3AQ9Y496 699 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 TIMM13Q9Y5L4 95 aaPredicted RBP11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 PDCD11Q14690 1871 aaKnown RBP11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 TRIP11Q15643 1979 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 A0A0B4J269 797 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 A0A1W2PRU2 124 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 LACTBL1A8MY62 500 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 OGTO15294 1046 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 CHADO15335 359 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 PAPSS2O95340 614 aaPredicted RBP11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 CYP11A1P05108 521 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 MYL4P12829 197 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 MARCKSP29966 332 aaPredicted RBP11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 GUCY2FP51841 1108 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 DUSP4Q13115 394 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ZRSR1Q15695 479 aaKnown RBP11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 RSPO4Q2I0M5 234 aaPredicted RBP11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 STXBP5Q5T5C0 1151 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 CENPPQ6IPU0 288 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 C1orf228Q6PIY5 440 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 GAREM2Q75VX8 874 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 TTC9BQ8N6N2 239 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 OR10T2Q8NGX3 314 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 PSMG2Q969U7 264 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 E2F7Q96AV8 911 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 LRRC3BQ96PB8 259 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 PGLYRP2Q96PD5 576 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 PLIN2Q99541 437 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 BLOC1S4Q9NUP1 217 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 NCDNQ9UBB6 729 aa11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 CPSF3Q9UKF6 684 aaKnown RBP11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 NDRG2Q9UN36 371 aaKnown RBP11.9□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ANO9A1A5B4 782 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 MYBPHLA2RUH7 354 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 PIRO00625 290 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ZNF263O14978 683 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 XPOTO43592 962 aaKnown RBP11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CD2BP2O95400 341 aaKnown RBP11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 NFICP08651 508 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 PAX3P23760 479 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 WEE1P30291 646 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 LIG4P49917 911 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CCR3P51677 355 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 LILRA4P59901 499 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 LMNB2Q03252 620 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 RABEP1Q15276 862 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 C9orf57Q5W0N0 161 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 OVOS1Q6IE37 1185 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 JADE1Q6IE81 842 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 USP37Q86T82 979 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 GPBP1Q86WP2 473 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CD302Q8IX05 232 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ATAD1Q8NBU5 361 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 BICD1Q96G01 975 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 TMX3Q96JJ7 454 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 TMEM209Q96SK2 561 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 PARVGQ9HBI0 331 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 PARD6AQ9NPB6 346 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 OBP2AQ9NY56 170 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ASB3Q9Y575 518 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 STYXL1Q9Y6J8 313 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CITO14578 2027 aa11.89□□□□□ -0.51
SPTLC1P4-201ENST00000435997 TSC2P49815 1807 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 K7ENM7 598 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 K7ESF4 209 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 GABBR2O75899 941 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ODC1P11926 461 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ATF6P18850 670 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CCNE1P24864 410 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CTHP32929 405 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 EPHB3P54753 998 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 GTF2BQ00403 316 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SATB1Q01826 763 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 GRIN1Q05586 938 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 PPP2R5DQ14738 602 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 MCTP1Q6DN14 999 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ARID3BQ8IVW6 561 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SECISBP2LQ93073 1101 aaKnown RBP11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CDK5RAP3Q96JB5 506 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SENP8Q96LD8 212 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CCSER1Q9C0I3 900 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ZCWPW1Q9H0M4 648 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ST6GALNAC4Q9H4F1 302 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SLITRK6Q9H5Y7 841 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 C8orf33Q9H7E9 229 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 RPF1Q9H9Y2 349 aaKnown RBP11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 LMAN1LQ9HAT1 526 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 IL21Q9HBE4 155 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 DERAQ9Y315 318 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 C2CD2Q9Y426 696 aa11.88□□□□□ -0.51
SPTLC1P4-201ENST00000435997 PRR5-ARHGAP8B1AHC4 643 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 TRAK2O60296 914 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 PPP1R37O75864 691 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SOAT2O75908 522 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 PRAMEF12O95522 483 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 FGF19O95750 216 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 PLCG1P19174 1290 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SDHBP21912 280 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 GJB2P29033 226 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms