RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 ZFYVE19Q96K21 471 aa11.45□□□□□ -0.58
CPNE1-214ENST00000435747 CEP170P1Q96L14 293 aa11.45□□□□□ -0.58
CPNE1-214ENST00000435747 EIF2AK1Q9BQI3 630 aaKnown RBP11.45□□□□□ -0.58
CPNE1-214ENST00000435747 GPR88Q9GZN0 384 aa11.45□□□□□ -0.58
CPNE1-214ENST00000435747 CSRNP2Q9H175 543 aa11.45□□□□□ -0.58
CPNE1-214ENST00000435747 TTC12Q9H892 705 aaPredicted RBP11.45□□□□□ -0.58
CPNE1-214ENST00000435747 BRMS1Q9HCU9 246 aa11.45□□□□□ -0.58
CPNE1-214ENST00000435747 ASAH2Q9NR71 780 aa11.45□□□□□ -0.58
CPNE1-214ENST00000435747 SNTG2Q9NY99 539 aa11.45□□□□□ -0.58
CPNE1-214ENST00000435747 KLK14Q9P0G3 267 aa11.45□□□□□ -0.58
CPNE1-214ENST00000435747 PARP2Q9UGN5 583 aa11.45□□□□□ -0.58
CPNE1-214ENST00000435747 EBF1Q9UH73 591 aa11.45□□□□□ -0.58
CPNE1-214ENST00000435747 PCDHA12Q9UN75 941 aa11.45□□□□□ -0.58
CPNE1-214ENST00000435747 COL12A1Q99715 3063 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 ZMYM2Q9UBW7 1377 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 A0A087WV48 116 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 DPYSL4O14531 572 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 CAPN9O14815 690 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 NEMFO60524 1076 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 TSPAN1O60635 241 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 RNF40O75150 1001 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 FGFR3P22607 806 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 ABCG1P45844 678 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 DGKEP52429 567 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 LAMTOR4Q0VGL1 99 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 EMC2Q15006 297 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 PTPAQ15257 358 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 TEAD2Q15562 447 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 CALCRLQ16602 461 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 USP39Q53GS9 565 aaKnown RBP11.44□□□□□ -0.58
CPNE1-214ENST00000435747 FERMT3Q86UX7 667 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 IFNLR1Q8IU57 520 aaPredicted RBP11.44□□□□□ -0.58
CPNE1-214ENST00000435747 SCUBE3Q8IX30 993 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 LEMD2Q8NC56 503 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 ZNF461Q8TAF7 563 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 PSPC1Q8WXF1 523 aaKnown RBP11.44□□□□□ -0.58
CPNE1-214ENST00000435747 SLC7A3Q8WY07 619 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 TMEM143Q96AN5 459 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 ZNF512Q96ME7 567 aaPredicted RBP11.44□□□□□ -0.58
CPNE1-214ENST00000435747 CYP4F11Q9HBI6 524 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 DKK4Q9UBT3 224 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 BACE2Q9Y5Z0 518 aa11.44□□□□□ -0.58
CPNE1-214ENST00000435747 DOPEY2Q9Y3R5 2298 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 NUP210Q8TEM1 1887 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-214ENST00000435747 CAPN8A6NHC0 703 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 OPHN1O60890 802 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 BAG4O95429 457 aaKnown RBP11.43□□□□□ -0.58
CPNE1-214ENST00000435747 FTH1P19P0C7X4 201 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 RARRES1P49788 294 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 FOSBP53539 338 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 ROR1Q01973 937 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 GUCY1B3Q02153 619 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 MAPK6Q16659 721 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 AMHR2Q16671 573 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 ITPRIPL2Q3MIP1 535 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 TMEM196Q5HYL7 178 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 FSTL4Q6MZW2 842 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 ANKS3Q6ZW76 656 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 EXOC8Q8IYI6 725 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 C4orf32Q8N8J7 132 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 PNPLA1Q8N8W4 532 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 RNF149Q8NC42 400 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 PIP4K2CQ8TBX8 421 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 ZSCAN31Q96LW9 406 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-214ENST00000435747 GTPBP2Q9BX10 602 aaKnown RBP11.43□□□□□ -0.58
CPNE1-214ENST00000435747 FOXP1Q9H334 677 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-214ENST00000435747 ANKEF1Q9NU02 776 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 MBD1Q9UIS9 605 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-214ENST00000435747 PCDHB9Q9Y5E1 797 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 INSL5Q9Y5Q6 135 aa11.43□□□□□ -0.58
CPNE1-214ENST00000435747 TNRC6BQ9UPQ9 1833 aaKnown RBP11.43□□□□□ -0.58
CPNE1-214ENST00000435747 NOTCH2Q04721 2471 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 CD2BP2O95400 341 aaKnown RBP11.42□□□□□ -0.58
CPNE1-214ENST00000435747 BCKDHBP21953 392 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 U2AF2P26368 475 aaKnown RBP eCLIP11.42□□□□□ -0.583e-26■□□□□ 9.9
CPNE1-214ENST00000435747 ARL2P36404 184 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 TXKP42681 527 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 PTENP60484 403 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 PLCB2Q00722 1185 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 KCNC4Q03721 635 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 POU5F1BQ06416 359 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 TNK2Q07912 1038 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 ORC2Q13416 577 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-214ENST00000435747 PCBP1Q15365 356 aaKnown RBP eCLIP11.42□□□□□ -0.582e-19■□□□□ 8.2
CPNE1-214ENST00000435747 TRIP6Q15654 476 aaKnown RBP11.42□□□□□ -0.58
CPNE1-214ENST00000435747 XKR9Q5GH70 373 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 SYT13Q7L8C5 426 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 OTUD6AQ7L8S5 288 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 CATSPER3Q86XQ3 398 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 GPIHBP1Q8IV16 184 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 ARID3BQ8IVW6 561 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-214ENST00000435747 TPH2Q8IWU9 490 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 TCEAL8Q8IYN2 117 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 SHKBP1Q8TBC3 707 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 C8orf76Q96K31 380 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 NFKBIZQ9BYH8 718 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 TPSD1Q9BZJ3 242 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 BMP2KQ9NSY1 1161 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-214ENST00000435747 MGAQ8IWI9 3026 aa11.42□□□□□ -0.58
CPNE1-214ENST00000435747 ATMQ13315 3056 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms