RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 SUSD3Q96L08 255 aa24.86■■□□□ 1.57
SMARCAL1-208ENST00000434435 KREMEN1Q96MU8 473 aa24.86■■□□□ 1.57
SMARCAL1-208ENST00000434435 SPAG5Q96R06 1193 aa24.86■■□□□ 1.57
SMARCAL1-208ENST00000434435 ARID3AQ99856 593 aa24.86■■□□□ 1.57
SMARCAL1-208ENST00000434435 PCDHB12Q9Y5F1 795 aa24.86■■□□□ 1.57
SMARCAL1-208ENST00000434435 SF3B1O75533 1304 aaKnown RBP eCLIP24.86■■□□□ 1.57
SMARCAL1-208ENST00000434435 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.85■■□□□ 1.57
SMARCAL1-208ENST00000434435 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.85■■□□□ 1.57
SMARCAL1-208ENST00000434435 CYB561D2O14569 222 aa24.85■■□□□ 1.57
SMARCAL1-208ENST00000434435 ODC1P11926 461 aa24.85■■□□□ 1.57
SMARCAL1-208ENST00000434435 ELAVL2Q12926 359 aaKnown RBP24.85■■□□□ 1.57
SMARCAL1-208ENST00000434435 TBX2Q13207 712 aaPredicted RBP24.85■■□□□ 1.57
SMARCAL1-208ENST00000434435 DPH6Q7L8W6 267 aa24.85■■□□□ 1.57
SMARCAL1-208ENST00000434435 APPL2Q8NEU8 664 aa24.85■■□□□ 1.57
SMARCAL1-208ENST00000434435 ZNF397Q8NF99 534 aaPredicted RBP24.85■■□□□ 1.57
SMARCAL1-208ENST00000434435 STK33Q9BYT3 514 aa24.85■■□□□ 1.57
SMARCAL1-208ENST00000434435 IMPACTQ9P2X3 320 aa24.85■■□□□ 1.57
SMARCAL1-208ENST00000434435 CAPN11Q9UMQ6 739 aa24.85■■□□□ 1.57
SMARCAL1-208ENST00000434435 RWDD3Q9Y3V2 267 aa24.85■■□□□ 1.57
SMARCAL1-208ENST00000434435 M0QZQ0 153 aa24.84■■□□□ 1.57
SMARCAL1-208ENST00000434435 RAP1GAPP47736 663 aa24.84■■□□□ 1.57
SMARCAL1-208ENST00000434435 DRAP1Q14919 205 aaPredicted RBP24.84■■□□□ 1.57
SMARCAL1-208ENST00000434435 FUT10Q6P4F1 479 aa24.84■■□□□ 1.57
SMARCAL1-208ENST00000434435 CHRDL2Q6WN34 429 aa24.84■■□□□ 1.57
SMARCAL1-208ENST00000434435 TMEM173Q86WV6 379 aaPredicted RBP24.84■■□□□ 1.57
SMARCAL1-208ENST00000434435 CPLX3Q8WVH0 158 aa24.84■■□□□ 1.57
SMARCAL1-208ENST00000434435 TMEM169Q96HH4 297 aa24.84■■□□□ 1.57
SMARCAL1-208ENST00000434435 IGSF21Q96ID5 467 aa24.84■■□□□ 1.57
SMARCAL1-208ENST00000434435 FAM124BQ9H5Z6 455 aaPredicted RBP24.84■■□□□ 1.57
SMARCAL1-208ENST00000434435 SPG21Q9NZD8 308 aa24.84■■□□□ 1.57
SMARCAL1-208ENST00000434435 PCDHB8Q9UN66 801 aa24.84■■□□□ 1.57
SMARCAL1-208ENST00000434435 LINC01553A4QN01 128 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 I3L4J1 428 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 WEE2P0C1S8 567 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 LINC00271P0C7V0 271 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 CASP14P31944 242 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 FXR1P51114 621 aaKnown RBP eCLIP24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 JAM2P57087 298 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 ZBED6P86452 979 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 SOWAHAQ2M3V2 549 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 ADGRF2Q8IZF7 708 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 TMEM86AQ8N2M4 240 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 TTC39CQ8N584 583 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 BCL7CQ8WUZ0 217 aaPredicted RBP24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 SHC3Q92529 594 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 BAP1Q92560 729 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 SDCBP2Q9H190 292 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 DSEQ9UL01 958 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 MYO6Q9UM54 1294 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 L1RE1Q9UN81 338 aa24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 LUC7L2Q9Y383 392 aaKnown RBP24.83■■□□□ 1.57
SMARCAL1-208ENST00000434435 F8VZ95 297 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 TACC1O75410 805 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 FAM163BP0C2L3 166 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 MYOGP15173 224 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 CD58P19256 250 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 CDH8P55286 799 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 RAB30Q15771 203 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 SMYD5Q6GMV2 418 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 PDXDC1Q6P996 788 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 LIMS2Q7Z4I7 341 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 METTL23Q86XA0 190 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 CNGA4Q8IV77 575 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 UBR7Q8N806 425 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 SPATA18Q8TC71 538 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 CISHQ9NSE2 258 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 PCDHB4Q9Y5E5 795 aa24.82■■□□□ 1.56
SMARCAL1-208ENST00000434435 AKR1B15C9JRZ8 316 aaPredicted RBP24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 SYN3O14994 580 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 MFAP3LO75121 409 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 CYP11A1P05108 521 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 CA3P07451 260 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 TYMPP19971 482 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 CTNNB1P35222 781 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 KRT9P35527 623 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 STAT1P42224 750 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 INCA1Q0VD86 236 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 FMNL3Q8IVF7 1028 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 PDCL2Q8N4E4 241 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 PDLIM2Q96JY6 352 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 MRPL45Q9BRJ2 306 aaKnown RBP24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 GPR88Q9GZN0 384 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 NUCKS1Q9H1E3 243 aaKnown RBP24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 PRO3102Q9H379 93 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 MSRAQ9UJ68 235 aa24.81■■□□□ 1.56
SMARCAL1-208ENST00000434435 LRRC53A6NM62 1247 aa24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 RNF225M0QZC1 329 aaPredicted RBP24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 ACO1P21399 889 aaKnown RBP24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 WARSP23381 471 aaKnown RBP24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 USP8P40818 1118 aa24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 FAM171A1Q5VUB5 890 aa24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 WSCD1Q658N2 575 aa24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 OR6B3Q8NGW1 331 aa24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 KBTBD7Q8WVZ9 684 aa24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 SAMD11Q96NU1 681 aa24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 PBX4Q9BYU1 374 aa24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 GPR62Q9BZJ7 368 aa24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 SNX25Q9H3E2 840 aa24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 BARX2Q9UMQ3 279 aaPredicted RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms