RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 ABHD15Q6UXT9 468 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 LBX2Q6XYB7 198 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 SYDE1Q6ZW31 735 aaPredicted RBP7.96□□□□□ -1.14
COL17A1-204ENST00000433822 ANO5Q75V66 913 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 ARMC9Q7Z3E5 817 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 TMC3Q7Z5M5 1100 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 SRLQ86TD4 932 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 KSR1Q8IVT5 923 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 EXOC8Q8IYI6 725 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 ZNF295-AS1Q8N0V1 137 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 PLEKHO2Q8TD55 490 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 FAXDC2Q96IV6 333 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 ZSWIM1Q9BR11 485 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 ERP44Q9BS26 406 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 TMEM109Q9BVC6 243 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 THAP2Q9H0W7 228 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 ATP6V0A4Q9HBG4 840 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 TMBIM4Q9HC24 238 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 JPH1Q9HDC5 661 aaPredicted RBP7.96□□□□□ -1.14
COL17A1-204ENST00000433822 PRM3Q9NNZ6 103 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 PICK1Q9NRD5 415 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 RAB20Q9NX57 234 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 HOXC10Q9NYD6 342 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 SMARCAL1Q9NZC9 954 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 SLC9A2Q9UBY0 812 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 FBXO40Q9UH90 709 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 PACSIN2Q9UNF0 486 aaPredicted RBP7.96□□□□□ -1.14
COL17A1-204ENST00000433822 CNTN6Q9UQ52 1028 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 NFS1Q9Y697 457 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 PAPPA2Q9BXP8 1791 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 GRIN2DO15399 1336 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 IGKV6D-21A0A0A0MT36 114 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 DYRK3O43781 588 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 EXTL3O43909 919 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 ZNF862O60290 1169 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 ATP9AO75110 1047 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 PHACTR2O75167 634 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 FGGP02679 453 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 FTLP02792 175 aaPredicted RBP7.95□□□□□ -1.14
COL17A1-204ENST00000433822 PAEPP09466 180 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 SUPT20HL2P0C7V6 817 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 TGFB3P10600 412 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 CYP11B1P15538 503 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 CHRNB2P17787 502 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 COPB2P35606 906 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 NAMPTP43490 491 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 GCLMP48507 274 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 PEX5P50542 639 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 GYS2P54840 703 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 DLG4P78352 724 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 FMO1Q01740 532 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 PRPF4BQ13523 1007 aaKnown RBP7.95□□□□□ -1.14
COL17A1-204ENST00000433822 BAATQ14032 418 aaPredicted RBP7.95□□□□□ -1.14
COL17A1-204ENST00000433822 PSMD6Q15008 389 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 MAP7D1Q3KQU3 841 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 SUPT20HL1Q3ZLR7 823 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 ZACNQ401N2 412 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 TTMPQ5BVD1 217 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 DNAJC21Q5F1R6 531 aaKnown RBP7.95□□□□□ -1.14
COL17A1-204ENST00000433822 ARTNQ5T4W7 220 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 DCAF12L1Q5VU92 463 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 ACAD10Q6JQN1 1059 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 NSMFQ6X4W1 530 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 CATSPERGQ6ZRH7 1159 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 CYFIP1Q7L576 1253 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 KRTAP1-3Q8IUG1 177 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 ARHGEF19Q8IW93 802 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 KLHL7Q8IXQ5 586 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 RPUSD2Q8IZ73 545 aaKnown RBP7.95□□□□□ -1.14
COL17A1-204ENST00000433822 CPXCR1Q8N123 301 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 DDX1Q92499 740 aaKnown RBP7.95□□□□□ -1.14
COL17A1-204ENST00000433822 ARHGEF26Q96DR7 871 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 ATG4CQ96DT6 458 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 KREMEN1Q96MU8 473 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 DHX33Q9H6R0 707 aaKnown RBP7.95□□□□□ -1.14
COL17A1-204ENST00000433822 ZFP64Q9NPA5 681 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 OSGEPQ9NPF4 335 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 XPNPEP1Q9NQW7 623 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 CYP26B1Q9NR63 512 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 CYP39A1Q9NYL5 469 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 CTTNBP2NLQ9P2B4 639 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 CNOT7Q9UIV1 285 aaKnown RBP7.95□□□□□ -1.14
COL17A1-204ENST00000433822 HACL1Q9UJ83 578 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 MTUS1Q9ULD2 1270 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 PCDHB2Q9Y5E7 798 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 PCDHA3Q9Y5H8 950 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 MAFBQ9Y5Q3 323 aaPredicted RBP7.95□□□□□ -1.14
COL17A1-204ENST00000433822 ALG6Q9Y672 507 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 ZNF541Q9H0D2 1346 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 LCTP09848 1927 aa7.95□□□□□ -1.14
COL17A1-204ENST00000433822 PTPRFP10586 1907 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 ZNFX1Q9P2E3 1918 aaKnown RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 ZSCAN5CA6NGD5 496 aaPredicted RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 A6NJY4 79 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 DDX39AO00148 427 aaKnown RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 EFSO43281 561 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 FAM153BP0C7A2 387 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 MYZAPP0CAP1 466 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 MYCLP12524 364 aaPredicted RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 UNGP13051 313 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms