RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 HERC2P3Q9BVR0 1158 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 RTN4Q9NQC3 1192 aaKnown RBP16.46■□□□□ 0.23
CNOT9-205ENST00000433439 ENTPD7Q9NQZ7 604 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 PCDHB8Q9UN66 801 aa16.46■□□□□ 0.23
CNOT9-205ENST00000433439 A0A1B0GTH6 734 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 GTPBP10A4D1E9 387 aaKnown RBP16.45■□□□□ 0.22
CNOT9-205ENST00000433439 PMM2O15305 246 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 SOD2P04179 222 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 URODP06132 367 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 DNAJB1P25685 340 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 PON1P27169 355 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 GLUD2P49448 558 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 AARSP49588 968 aaKnown RBP eCLIP16.45■□□□□ 0.22
CNOT9-205ENST00000433439 KLK7P49862 253 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 CDH8P55286 799 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 RTP2Q5QGT7 225 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 PLPP4Q5VZY2 271 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 GJB7Q6PEY0 223 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 TRIM65Q6PJ69 517 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 PRSS55Q6UWB4 352 aaPredicted RBP16.45■□□□□ 0.22
CNOT9-205ENST00000433439 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.45■□□□□ 0.22
CNOT9-205ENST00000433439 RRAGAQ7L523 313 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 ARHGEF19Q8IW93 802 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 LMO3Q8TAP4 145 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 TCF25Q9BQ70 676 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 TTPALQ9BTX7 342 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 XPO4Q9C0E2 1151 aaKnown RBP16.45■□□□□ 0.22
CNOT9-205ENST00000433439 NIF3L1Q9GZT8 377 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 TTYH1Q9H313 450 aaPredicted RBP16.45■□□□□ 0.22
CNOT9-205ENST00000433439 PRDM12Q9H4Q4 367 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 SMYD3Q9H7B4 428 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 GDAP2Q9NXN4 497 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 L1RE1Q9UN81 338 aa16.45■□□□□ 0.22
CNOT9-205ENST00000433439 ARHGEF37A1IGU5 675 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 M0QZQ0 153 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 SYN3O14994 580 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 STAU1O95793 577 aaKnown RBP16.44■□□□□ 0.22
CNOT9-205ENST00000433439 WEE2P0C1S8 567 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 CD58P19256 250 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 PAX3P23760 479 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 ERVFC1P60507 584 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 YWHAHQ04917 246 aaPredicted RBP16.44■□□□□ 0.22
CNOT9-205ENST00000433439 SOWAHAQ2M3V2 549 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 GLYCTKQ8IVS8 523 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 ADGRF2Q8IZF7 708 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 PDCL2Q8N4E4 241 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 MRPL45Q9BRJ2 306 aaKnown RBP16.44■□□□□ 0.22
CNOT9-205ENST00000433439 TRIM5Q9C035 493 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 SDCBP2Q9H190 292 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 VRTNQ9H8Y1 702 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 UBE2TQ9NPD8 197 aaPredicted RBP16.44■□□□□ 0.22
CNOT9-205ENST00000433439 TLR9Q9NR96 1032 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 FAM207AQ9NSI2 230 aaPredicted RBP16.44■□□□□ 0.22
CNOT9-205ENST00000433439 PCDHGC5Q9Y5F6 944 aa16.44■□□□□ 0.22
CNOT9-205ENST00000433439 CBFA2T2O43439 604 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 LPXNO60711 386 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 CXCL14O95715 111 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 TPM3P06753 285 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 FGFR3P22607 806 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 IRS1P35568 1242 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 ASPAP45381 313 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 ARPP19P56211 112 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 UBE3AQ05086 875 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 BMS1Q14692 1282 aaKnown RBP16.43■□□□□ 0.22
CNOT9-205ENST00000433439 GRIN2CQ14957 1233 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 NR1I3Q14994 352 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 ARHGAP44Q17R89 818 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 CTXN3Q4LDR2 81 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 VARS2Q5ST30 1063 aaKnown RBP16.43■□□□□ 0.22
CNOT9-205ENST00000433439 OVOS1Q6IE37 1185 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 PHLDB3Q6NSJ2 640 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 RNF168Q8IYW5 571 aaPredicted RBP16.43■□□□□ 0.22
CNOT9-205ENST00000433439 TOP6BLQ8N6T0 577 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 OR6B3Q8NGW1 331 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 KAT5Q92993 513 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 ARID3AQ99856 593 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 ZBP1Q9H171 429 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 SNX25Q9H3E2 840 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 MRPL17Q9NRX2 175 aaKnown RBP16.43■□□□□ 0.22
CNOT9-205ENST00000433439 DSEQ9UL01 958 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 LZTS1Q9Y250 596 aa16.43■□□□□ 0.22
CNOT9-205ENST00000433439 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.42■□□□□ 0.22
CNOT9-205ENST00000433439 AP5Z1O43299 807 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 HCRTO43612 131 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 EFEMP2O95967 443 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 CTSAP10619 480 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 RPL17P18621 184 aaKnown RBP16.42■□□□□ 0.22
CNOT9-205ENST00000433439 TYMPP19971 482 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 CDR1P51861 262 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 DSG1Q02413 1049 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 CUL2Q13617 745 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 PSMD5Q16401 504 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 UVSSAQ2YD98 709 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 OSTM1Q86WC4 334 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 THEM5Q8N1Q8 247 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 NEK11Q8NG66 645 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 SIX2Q9NPC8 291 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 DDX43Q9NXZ2 648 aaKnown RBP16.42■□□□□ 0.22
CNOT9-205ENST00000433439 APEX2Q9UBZ4 518 aa16.42■□□□□ 0.22
CNOT9-205ENST00000433439 DNAJC12Q9UKB3 198 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms