RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 A0A0U1RQJ8 604 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 ZNF263O14978 683 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 DDHD2O94830 711 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 WEE2P0C1S8 567 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 CYLC1P35663 651 aaPredicted RBP11.6□□□□□ -0.55
CRIM1-204ENST00000428774 PNPLA4P41247 253 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 CDH8P55286 799 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 YWHAEP62258 255 aaKnown RBP11.6□□□□□ -0.55
CRIM1-204ENST00000428774 DEFB103AP81534 67 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 IKBKEQ14164 716 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 TMEM240Q5SV17 173 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 TMEM270Q6UE05 265 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 CD300LGQ6UXG3 332 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 ZNF365Q70YC5 407 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 TMCO2Q7Z6W1 182 aaPredicted RBP11.6□□□□□ -0.55
CRIM1-204ENST00000428774 SLC47A2Q86VL8 602 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 FMNL3Q8IVF7 1028 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 CCDC170Q8IYT3 715 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 WHAMMQ8TF30 809 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 ATRIPQ8WXE1 791 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 RABGGTAQ92696 567 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 CASD1Q96PB1 797 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 TWNKQ96RR1 684 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 GDF15Q99988 308 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 LBHD1Q9BQE6 289 aaPredicted RBP11.6□□□□□ -0.55
CRIM1-204ENST00000428774 MRPL45Q9BRJ2 306 aaKnown RBP11.6□□□□□ -0.55
CRIM1-204ENST00000428774 CYP3A43Q9HB55 503 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 LRFN2Q9ULH4 789 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 NENFQ9UMX5 172 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 R3HCC1Q9Y3T6 440 aaKnown RBP11.6□□□□□ -0.55
CRIM1-204ENST00000428774 PCDHB7Q9Y5E2 793 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.6□□□□□ -0.55
CRIM1-204ENST00000428774 SNX9Q9Y5X1 595 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 PDE4DIPQ5VU43 2346 aa11.6□□□□□ -0.55
CRIM1-204ENST00000428774 NLRC5Q86WI3 1866 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 A0A087X0T9 212 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 ABHD14A-ACY1A0A1B0GW23 586 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 KPNA7A9QM74 516 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 ESPNB1AK53 854 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 EIF3CLB5ME19 914 aaKnown RBP11.59□□□□□ -0.55
CRIM1-204ENST00000428774 F8W810 466 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 DDX3XO00571 662 aaKnown RBP eCLIP11.59□□□□□ -0.55
CRIM1-204ENST00000428774 AKR1B10O60218 316 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 CILPO75339 1184 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 KIF4AO95239 1232 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 PFKMP08237 780 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 FAM228BP0C875 321 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 P4HA1P13674 534 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 CYP11B1P15538 503 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 CHRNB2P17787 502 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 PDE6CP51160 858 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 WDR5P61964 334 aaKnown RBP11.59□□□□□ -0.55
CRIM1-204ENST00000428774 GFPT1Q06210 699 aaPredicted RBP11.59□□□□□ -0.55
CRIM1-204ENST00000428774 INCA1Q0VD86 236 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 ORC1Q13415 861 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 PPIGQ13427 754 aaKnown RBP eCLIP11.59□□□□□ -0.55
CRIM1-204ENST00000428774 UPP1Q16831 310 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 TAF3Q5VWG9 929 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 OTOP2Q7RTS6 562 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 LIMS2Q7Z4I7 341 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 PALB2Q86YC2 1186 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 ZNF280BQ86YH2 543 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 COLGALT2Q8IYK4 626 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 KBTBD7Q8WVZ9 684 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 DDX1Q92499 740 aaKnown RBP11.59□□□□□ -0.55
CRIM1-204ENST00000428774 CCDC42Q96M95 316 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 UROC1Q96N76 676 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 EIF3CQ99613 913 aaKnown RBP11.59□□□□□ -0.55
CRIM1-204ENST00000428774 ELOVL4Q9GZR5 314 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 DEF6Q9H4E7 631 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 GDAP2Q9NXN4 497 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 CXXC1Q9P0U4 656 aaPredicted RBP11.59□□□□□ -0.55
CRIM1-204ENST00000428774 L1RE1Q9UN81 338 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 PPP2R2CQ9Y2T4 447 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 ADGRG1Q9Y653 693 aa11.59□□□□□ -0.55
CRIM1-204ENST00000428774 BZW2Q9Y6E2 419 aaKnown RBP11.59□□□□□ -0.55
CRIM1-204ENST00000428774 EPN1Q9Y6I3 576 aaPredicted RBP11.59□□□□□ -0.55
CRIM1-204ENST00000428774 CEP290O15078 2479 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 TBKBP1A7MCY6 615 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 HOXA2O43364 376 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 HCRTO43612 131 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 LCA5LO95447 670 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 ITGB1P05556 798 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 MMEP08473 750 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 CCDC172P0C7W6 258 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 MSNP26038 577 aaKnown RBP11.58□□□□□ -0.56
CRIM1-204ENST00000428774 ANXA13P27216 316 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 RPL9P32969 192 aaKnown RBP11.58□□□□□ -0.56
CRIM1-204ENST00000428774 BRCC3P46736 316 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 AARSP49588 968 aaKnown RBP eCLIP11.58□□□□□ -0.56
CRIM1-204ENST00000428774 RAD23BP54727 409 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 LILRA4P59901 499 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 FMO1Q01740 532 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 CYP27A1Q02318 531 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 SHHQ15465 462 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 SLC18A3Q16572 532 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 SOWAHAQ2M3V2 549 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 PAN2Q504Q3 1202 aaKnown RBP11.58□□□□□ -0.56
CRIM1-204ENST00000428774 ZNF394Q53GI3 561 aa11.58□□□□□ -0.56
CRIM1-204ENST00000428774 SMYD5Q6GMV2 418 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms