RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 TSR1Q2NL82 804 aaKnown RBP8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 TIGD5Q53EQ6 642 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 FAM109BQ6ICB4 259 aaPredicted RBP8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 DPY19L2P1Q6NXN4 242 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 PDXDC1Q6P996 788 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 KCNT2Q6UVM3 1135 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 TMEM173Q86WV6 379 aaPredicted RBP8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 ADGRF2Q8IZF7 708 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 PDCL2Q8N4E4 241 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 COLGALT1Q8NBJ5 622 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 APPL2Q8NEU8 664 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 GDF15Q99988 308 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 NAA15Q9BXJ9 866 aaKnown RBP8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 STK33Q9BYT3 514 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 BCO2Q9BYV7 579 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 EDEM3Q9BZQ6 932 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 SDCBP2Q9H190 292 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 CWH43Q9H720 699 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 CYP3A43Q9HB55 503 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 ZNHIT6Q9NWK9 470 aaKnown RBP8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 MARCH5Q9NX47 278 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 GDAP2Q9NXN4 497 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 ADAM28Q9UKQ2 775 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 CAPN11Q9UMQ6 739 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 L1RE1Q9UN81 338 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 PCDHB4Q9Y5E5 795 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 COL4A6Q14031 1691 aa8.46□□□□□ -1.05
HMGA1P4-201ENST00000428643 MICAL3Q7RTP6 2002 aa8.46□□□□□ -1.05
HMGA1P4-201ENST00000428643 LCHNA4D1U4 455 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 CARNS1A5YM72 827 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 RNF225M0QZC1 329 aaPredicted RBP8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 GFPT2O94808 682 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 CTNNB1P35222 781 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 SOX5P35711 763 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 AARSP49588 968 aaKnown RBP eCLIP8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 CDH8P55286 799 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 JAM2P57087 298 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 ELAVL2Q12926 359 aaKnown RBP8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 SOWAHAQ2M3V2 549 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 SFMBT2Q5VUG0 894 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 WSCD1Q658N2 575 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 FUT10Q6P4F1 479 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 TMEM270Q6UE05 265 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 CCDC186Q7Z3E2 898 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 METTL23Q86XA0 190 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 FMNL3Q8IVF7 1028 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 TTC39CQ8N584 583 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 TOP6BLQ8N6T0 577 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 RBBP8NLQ8NC74 664 aaPredicted RBP8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 OR6B3Q8NGW1 331 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 BCL7CQ8WUZ0 217 aaPredicted RBP8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 SHC3Q92529 594 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 BAP1Q92560 729 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 JAKMIP2Q96AA8 810 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 TMEM169Q96HH4 297 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 FAXDC2Q96IV6 333 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 PDLIM2Q96JY6 352 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 SUSD3Q96L08 255 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 SENP8Q96LD8 212 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 MRPL45Q9BRJ2 306 aaKnown RBP8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 DNAI2Q9GZS0 605 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 NUCKS1Q9H1E3 243 aaKnown RBP8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 SNX25Q9H3E2 840 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 CISHQ9NSE2 258 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 ABHD10Q9NUJ1 306 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 SPG21Q9NZD8 308 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 HMGXB4Q9UGU5 601 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 PUF60Q9UHX1 559 aaKnown RBP8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 DSEQ9UL01 958 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 MYO6Q9UM54 1294 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 PCDHB8Q9UN66 801 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 PCDHB12Q9Y5F1 795 aa8.46□□□□□ -1.06
HMGA1P4-201ENST00000428643 LINC01553A4QN01 128 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 FOXN3O00409 490 aaPredicted RBP8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 CYP26A1O43174 497 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 NRDCO43847 1150 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 CILPO75339 1184 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 CA3P07451 260 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 MYOGP15173 224 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 CD19P15391 556 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 FERP16591 822 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 ACO1P21399 889 aaKnown RBP8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 WARSP23381 471 aaKnown RBP8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 TKTP29401 623 aaKnown RBP8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 NDST1P52848 882 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 INCA1Q0VD86 236 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 ORC1Q13415 861 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 ARID5BQ14865 1188 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 ZNF394Q53GI3 561 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 TDRD12Q587J7 1177 aaKnown RBP8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 FAM171A1Q5VUB5 890 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 CD300LGQ6UXG3 332 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 CHRDL2Q6WN34 429 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 CEP57Q86XR8 500 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 FAM71AQ8IYT1 594 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 TDHQ8IZJ6 230 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 SLC39A11Q8N1S5 342 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 OR8K1Q8NGG5 319 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 KBTBD7Q8WVZ9 684 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms