RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 SMYD3Q9H7B4 428 aa23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 PRDM10Q9NQV6 1147 aa23.15■■□□□ 1.3
CNEP1R1-202ENST00000427478 TTI1O43156 1089 aa23.14■■□□□ 1.3
CNEP1R1-202ENST00000427478 GRM5P41594 1212 aa23.14■■□□□ 1.3
CNEP1R1-202ENST00000427478 RWDD2BP57060 319 aa23.14■■□□□ 1.3
CNEP1R1-202ENST00000427478 LACTBP83111 547 aaPredicted RBP23.14■■□□□ 1.3
CNEP1R1-202ENST00000427478 MAMLD1Q13495 774 aa23.14■■□□□ 1.3
CNEP1R1-202ENST00000427478 DCAF4L1Q3SXM0 396 aa23.14■■□□□ 1.3
CNEP1R1-202ENST00000427478 CCDC26Q8TAB7 109 aa23.14■■□□□ 1.3
CNEP1R1-202ENST00000427478 DNAJB3Q8WWF6 145 aa23.14■■□□□ 1.3
CNEP1R1-202ENST00000427478 CCDC102AQ96A19 550 aa23.14■■□□□ 1.3
CNEP1R1-202ENST00000427478 MRPL47Q9HD33 250 aaKnown RBP23.14■■□□□ 1.3
CNEP1R1-202ENST00000427478 HAS3O00219 553 aa23.14■■□□□ 1.29
CNEP1R1-202ENST00000427478 GJB6O95452 261 aa23.14■■□□□ 1.29
CNEP1R1-202ENST00000427478 LSM8O95777 96 aaKnown RBP23.14■■□□□ 1.29
CNEP1R1-202ENST00000427478 MMP8P22894 467 aa23.14■■□□□ 1.29
CNEP1R1-202ENST00000427478 HOXA11P31270 313 aaPredicted RBP23.14■■□□□ 1.29
CNEP1R1-202ENST00000427478 ORC1Q13415 861 aa23.14■■□□□ 1.29
CNEP1R1-202ENST00000427478 PLEKHA7Q6IQ23 1121 aa23.14■■□□□ 1.29
CNEP1R1-202ENST00000427478 CAVIN3Q969G5 261 aa23.14■■□□□ 1.29
CNEP1R1-202ENST00000427478 AGAP1Q9UPQ3 857 aa23.14■■□□□ 1.29
CNEP1R1-202ENST00000427478 SCINQ9Y6U3 715 aa23.14■■□□□ 1.29
CNEP1R1-202ENST00000427478 PASKQ96RG2 1323 aa23.13■■□□□ 1.29
CNEP1R1-202ENST00000427478 TREHO43280 583 aa23.13■■□□□ 1.29
CNEP1R1-202ENST00000427478 CD19P15391 556 aa23.13■■□□□ 1.29
CNEP1R1-202ENST00000427478 ATICP31939 592 aa23.13■■□□□ 1.29
CNEP1R1-202ENST00000427478 ZNF200P98182 395 aaPredicted RBP23.13■■□□□ 1.29
CNEP1R1-202ENST00000427478 CDC42EP1Q00587 391 aa23.13■■□□□ 1.29
CNEP1R1-202ENST00000427478 SREBF2Q12772 1141 aa23.13■■□□□ 1.29
CNEP1R1-202ENST00000427478 DAB2IPQ5VWQ8 1189 aa23.13■■□□□ 1.29
CNEP1R1-202ENST00000427478 MAATS1Q7Z4T9 603 aa23.13■■□□□ 1.29
CNEP1R1-202ENST00000427478 TMEM35BQ8NCS4 154 aa23.13■■□□□ 1.29
CNEP1R1-202ENST00000427478 KIF12Q96FN5 646 aa23.13■■□□□ 1.29
CNEP1R1-202ENST00000427478 EIF2AQ9BY44 585 aaKnown RBP23.13■■□□□ 1.29
CNEP1R1-202ENST00000427478 C2CD2Q9Y426 696 aa23.13■■□□□ 1.29
CNEP1R1-202ENST00000427478 FAM153BP0C7A2 387 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 FAM153CQ494X1 144 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 HPDLQ96IR7 371 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 DPP3Q9NY33 737 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 SNTG2Q9NY99 539 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 FAM153AQ9UHL3 310 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 PCDHGC3Q9UN70 934 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 TLL2Q9Y6L7 1015 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 PROSCO94903 275 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 DARSP14868 501 aaKnown RBP23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 SLC1A1P43005 524 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 ADAM17P78536 824 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 SLC27A1Q6PCB7 646 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 DDX42Q86XP3 938 aaKnown RBP eCLIP23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 ZIC5Q96T25 663 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 CXCL16Q9H2A7 254 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 PARVAQ9NVD7 372 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 HMGXB4Q9UGU5 601 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 ITGA11Q9UKX5 1188 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 Q9Y3F1 56 aa23.12■■□□□ 1.29
CNEP1R1-202ENST00000427478 IGHA2P01877 340 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 HSPA6P17066 643 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 RAD23BP54727 409 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 HLTFQ14527 1009 aaKnown RBP eCLIP23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 FSCN1Q16658 493 aaKnown RBP23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 TWNKQ96RR1 684 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 VRTNQ9H8Y1 702 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 ABT1Q9ULW3 272 aaKnown RBP23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 CEP83Q9Y592 693 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 TLR3O15455 904 aaKnown RBP23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 CALB1P05937 261 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 GABPB1Q06547 395 aaPredicted RBP23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 PPP2R5EQ16537 467 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 HSP90B2PQ58FF3 399 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 DENND1BQ6P3S1 775 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 NOTUMQ6P988 496 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 APBB1IPQ7Z5R6 666 aaPredicted RBP23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 SLC13A5Q86YT5 568 aaPredicted RBP23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 ZDHHC14Q8IZN3 488 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 WDTC1Q8N5D0 677 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 TSEN2Q8NCE0 465 aaKnown RBP23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 FEZF2Q8TBJ5 459 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 FAXDC2Q96IV6 333 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 KATNAL1Q9BW62 490 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 HES2Q9Y543 173 aa23.11■■□□□ 1.29
CNEP1R1-202ENST00000427478 TCRBV7S2A1N4TA0A589 114 aa23.1■■□□□ 1.29
CNEP1R1-202ENST00000427478 PHF2O75151 1096 aa23.1■■□□□ 1.29
CNEP1R1-202ENST00000427478 AKR1A1P14550 325 aa23.1■■□□□ 1.29
CNEP1R1-202ENST00000427478 RBP5P82980 135 aa23.1■■□□□ 1.29
CNEP1R1-202ENST00000427478 NNTQ13423 1086 aa23.1■■□□□ 1.29
CNEP1R1-202ENST00000427478 CUL1Q13616 776 aa23.1■■□□□ 1.29
CNEP1R1-202ENST00000427478 NT5DC4Q86YG4 428 aa23.1■■□□□ 1.29
CNEP1R1-202ENST00000427478 PRELID2Q8N945 189 aa23.1■■□□□ 1.29
CNEP1R1-202ENST00000427478 TMEM40Q8WWA1 233 aa23.1■■□□□ 1.29
CNEP1R1-202ENST00000427478 TRIM51Q9BSJ1 452 aa23.1■■□□□ 1.29
CNEP1R1-202ENST00000427478 ZNF518BQ9C0D4 1074 aa23.1■■□□□ 1.29
CNEP1R1-202ENST00000427478 BHMG1C9JSJ3 638 aaPredicted RBP23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 P4HA1P13674 534 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 EIF4BP23588 611 aaKnown RBP23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 CDH5P33151 784 aaPredicted RBP23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 AARSP49588 968 aaKnown RBP eCLIP23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 FAM193AP78312 1265 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 DR1Q01658 176 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 LLGL1Q15334 1064 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 CD302Q8IX05 232 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms