RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 RNF41Q9H4P4 317 aaPredicted RBP8.12□□□□□ -1.11
LINC00649-203ENST00000427447 EXD2Q9NVH0 621 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 WDR35Q9P2L0 1181 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 MEN1O00255 615 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 KLHL2O95198 593 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 FCGR1AP12314 374 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 TARSP26639 723 aaKnown RBP8.12□□□□□ -1.11
LINC00649-203ENST00000427447 ADD2P35612 726 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 HTRA4P83105 476 aaPredicted RBP8.12□□□□□ -1.11
LINC00649-203ENST00000427447 BRMS1LQ5PSV4 323 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 DPPA2Q7Z7J5 298 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 CLEC4FQ8N1N0 589 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 ATPAF2Q8N5M1 289 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 IQUBQ8NA54 791 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 CYGBQ8WWM9 190 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 RAD51AP1Q96B01 352 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 NT5C3AQ9H0P0 336 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 GPBP1L1Q9HC44 474 aaPredicted RBP8.12□□□□□ -1.11
LINC00649-203ENST00000427447 A1CFQ9NQ94 594 aaKnown RBP8.12□□□□□ -1.11
LINC00649-203ENST00000427447 GTF2A1LQ9UNN4 478 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 CCDC188H7C350 402 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 GUCA1CO95843 209 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 FAM58BPP0C7Q3 252 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 IL1R1P14778 569 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 RPL4P36578 427 aaKnown RBP8.12□□□□□ -1.11
LINC00649-203ENST00000427447 GYS2P54840 703 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 RPL10AP62906 217 aaKnown RBP8.12□□□□□ -1.11
LINC00649-203ENST00000427447 ENPEPQ07075 957 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 ZBTB6Q15916 424 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 DDB1Q16531 1140 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 CCT8L2Q96SF2 557 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 TMEM79Q9BSE2 394 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 SLC35C2Q9NQQ7 365 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 ADAMTS8Q9UP79 889 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 CCNKO75909 580 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 TRADDQ15628 312 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 WDR45BQ5MNZ6 344 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 RNF219Q5W0B1 726 aaPredicted RBP8.12□□□□□ -1.11
LINC00649-203ENST00000427447 DPF1Q92782 380 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 SENP7Q9BQF6 1050 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 FBRSL1Q9HCM7 1045 aaKnown RBP8.12□□□□□ -1.11
LINC00649-203ENST00000427447 GGA3Q9NZ52 723 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 GMIPQ9P107 970 aa8.12□□□□□ -1.11
LINC00649-203ENST00000427447 CLCA1A8K7I4 914 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 DHFRP00374 187 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 SLCO1A2P46721 670 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 ADCY7P51828 1080 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 GALNT3Q14435 633 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 DLG2Q15700 870 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 PKN2Q16513 984 aaKnown RBP8.11□□□□□ -1.11
LINC00649-203ENST00000427447 SLC25A24Q6NUK1 477 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 KIAA1143Q96AT1 154 aaPredicted RBP8.11□□□□□ -1.11
LINC00649-203ENST00000427447 ECHDC1Q9NTX5 307 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 C9orf84Q5VXU9 1444 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 ARHGEF12Q9NZN5 1544 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 SPTLC2O15270 562 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 FAM153BP0C7A2 387 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 COPS2P61201 443 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 MTX1Q13505 466 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 ITIH4Q14624 930 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 PPP1R2P3Q6NXS1 205 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 NT5DC3Q86UY8 548 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 CCDC185Q8N715 623 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 ENOPH1Q9UHY7 261 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 VANGL2Q9ULK5 521 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 CCDC88AQ3V6T2 1871 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 LAMC1P11047 1609 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 NPIPA5A0A0B4J1W7 369 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 ATP6V1G2-DDX39BF2Z307 99 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 ATP6V1G2O95670 118 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 GNA14O95837 355 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 TKTP29401 623 aaKnown RBP8.11□□□□□ -1.11
LINC00649-203ENST00000427447 CYP51A1Q16850 503 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 VMACQ2NL98 169 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 PNMA1Q8ND90 353 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 ELMO1Q92556 727 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 ERLEC1Q96DZ1 483 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 CDO1Q16878 200 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 PPHLN1Q8NEY8 458 aaKnown RBP8.11□□□□□ -1.11
LINC00649-203ENST00000427447 CABP2Q9NPB3 220 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 GAPVD1Q14C86 1478 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 HUS1O60921 280 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 N4BP1O75113 896 aaKnown RBP8.11□□□□□ -1.11
LINC00649-203ENST00000427447 MYL6BP14649 208 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 ARID5AQ03989 594 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 MSANTD2Q6P1R3 559 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 CNBD1Q8NA66 436 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 DLG3Q92796 817 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 GDPD2Q9HCC8 539 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 EXOSC4Q9NPD3 245 aaKnown RBP8.11□□□□□ -1.11
LINC00649-203ENST00000427447 METTL5Q9NRN9 209 aaKnown RBP8.11□□□□□ -1.11
LINC00649-203ENST00000427447 TBCCD1Q9NVR7 557 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 MTRRQ9UBK8 725 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 OIP5O43482 229 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 CHRM1P11229 460 aaPredicted RBP8.11□□□□□ -1.11
LINC00649-203ENST00000427447 CDH6P55285 790 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 TRMT5Q32P41 509 aaKnown RBP8.11□□□□□ -1.11
LINC00649-203ENST00000427447 FASTKD1Q53R41 847 aaKnown RBP8.11□□□□□ -1.11
LINC00649-203ENST00000427447 BOLA3Q53S33 107 aa8.11□□□□□ -1.11
LINC00649-203ENST00000427447 AFTPHQ6ULP2 937 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms