RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 WHAMMQ8TF30 809 aa18.52■□□□□ 0.55
FN1-208ENST00000426059 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.52■□□□□ 0.55
FN1-208ENST00000426059 FAM105AQ9NUU6 356 aa18.52■□□□□ 0.55
FN1-208ENST00000426059 CYP1A1P04798 512 aaPredicted RBP18.51■□□□□ 0.55
FN1-208ENST00000426059 CD19P15391 556 aa18.51■□□□□ 0.55
FN1-208ENST00000426059 PTK7Q13308 1070 aa18.51■□□□□ 0.55
FN1-208ENST00000426059 IFI16Q16666 785 aaKnown RBP18.51■□□□□ 0.55
FN1-208ENST00000426059 WHAMMP3Q1A5X7 153 aa18.51■□□□□ 0.55
FN1-208ENST00000426059 TRIM71Q2Q1W2 868 aaKnown RBP18.51■□□□□ 0.55
FN1-208ENST00000426059 RPAINQ86UA6 219 aa18.51■□□□□ 0.55
FN1-208ENST00000426059 BEST2Q8NFU1 509 aa18.51■□□□□ 0.55
FN1-208ENST00000426059 MS4A14Q96JA4 679 aa18.51■□□□□ 0.55
FN1-208ENST00000426059 BEGAINQ9BUH8 593 aa18.51■□□□□ 0.55
FN1-208ENST00000426059 SNX9Q9Y5X1 595 aa18.51■□□□□ 0.55
FN1-208ENST00000426059 TMEM110-MUSTN1A8MSY1 372 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 RAD23BP54727 409 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 TNNC1P63316 161 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 LPIN1Q14693 890 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 CREG2Q8IUH2 290 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 C11orf70Q9BRQ4 267 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 NUP85Q9BW27 656 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 ELOVL4Q9GZR5 314 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 CNOT8Q9UFF9 292 aaKnown RBP18.5■□□□□ 0.55
FN1-208ENST00000426059 DERAQ9Y315 318 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 IGFBP6P24592 240 aaPredicted RBP18.5■□□□□ 0.55
FN1-208ENST00000426059 NSFP46459 744 aaKnown RBP18.5■□□□□ 0.55
FN1-208ENST00000426059 RNASE9P60153 205 aaKnown RBP18.5■□□□□ 0.55
FN1-208ENST00000426059 NOMO3P69849 1222 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 RBM10P98175 930 aaKnown RBP18.5■□□□□ 0.55
FN1-208ENST00000426059 TUBB2AQ13885 445 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 C9orf57Q5W0N0 161 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 DPH6Q7L8W6 267 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 PEX26Q7Z412 305 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 CPNE8Q86YQ8 564 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 MCOLN2Q8IZK6 566 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 CEP112Q8N8E3 955 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 RNF169Q8NCN4 708 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 CAGE1Q8TC20 777 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 UBXN4Q92575 508 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 TUBB2BQ9BVA1 445 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 VRTNQ9H8Y1 702 aa18.5■□□□□ 0.55
FN1-208ENST00000426059 EFCAB8A8MWE9 144 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 PTGESO14684 152 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 GPR182O15218 404 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 RRM1P23921 792 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 MLH1P40692 756 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 MYO1EQ12965 1108 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 PAK2Q13177 524 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 SLC4A11Q8NBS3 891 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 ERVK-5Q9HDB9 667 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 UBQLN1Q9UMX0 589 aaKnown RBP18.49■□□□□ 0.55
FN1-208ENST00000426059 CILPO75339 1184 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 ZSCAN20P17040 1043 aaPredicted RBP18.49■□□□□ 0.55
FN1-208ENST00000426059 PRMT2P55345 433 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 CENPCQ03188 943 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 SLFN11Q7Z7L1 901 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 NT5DC3Q86UY8 548 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 RHOT2Q8IXI1 618 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 NOA1Q8NC60 698 aaKnown RBP18.49■□□□□ 0.55
FN1-208ENST00000426059 C1orf131Q8NDD1 294 aaKnown RBP18.49■□□□□ 0.55
FN1-208ENST00000426059 GAD1Q99259 594 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 TSEN34Q9BSV6 310 aaKnown RBP18.49■□□□□ 0.55
FN1-208ENST00000426059 TRIM7Q9C029 511 aa18.49■□□□□ 0.55
FN1-208ENST00000426059 CTAGE15A4D2H0 777 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 TLR3O15455 904 aaKnown RBP18.48■□□□□ 0.55
FN1-208ENST00000426059 CTAGE8P0CG41 777 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 CKBP12277 381 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 NDST1P52848 882 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 MESDQ14696 234 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 RPS6KA1Q15418 735 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 XKR4Q5GH76 650 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 MMS22LQ6ZRQ5 1243 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 RSRC2Q7L4I2 434 aaKnown RBP18.48■□□□□ 0.55
FN1-208ENST00000426059 CTAGE6Q86UF2 777 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 CTAGE4Q8IX94 777 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 ZNF564Q8TBZ8 553 aaPredicted RBP18.48■□□□□ 0.55
FN1-208ENST00000426059 RABGGTAQ92696 567 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 DEFB118Q96PH6 123 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 MRPL45Q9BRJ2 306 aaKnown RBP18.48■□□□□ 0.55
FN1-208ENST00000426059 GTF3C4Q9UKN8 822 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 KCNK3O14649 394 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 SPTLC1O15269 473 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 HCRTO43612 131 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 KIF4AO95239 1232 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 GJB6O95452 261 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 CYP1A2P05177 515 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 P4HA1P13674 534 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 KCNE1P15382 129 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 YWHAEP62258 255 aaKnown RBP18.48■□□□□ 0.55
FN1-208ENST00000426059 MON1BQ7L1V2 547 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 GSTCDQ8NEC7 633 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 RNF216Q9NWF9 866 aaPredicted RBP18.48■□□□□ 0.55
FN1-208ENST00000426059 MIOSQ9NXC5 875 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 PTPN22Q9Y2R2 807 aa18.48■□□□□ 0.55
FN1-208ENST00000426059 KBTBD13C9JR72 458 aa18.47■□□□□ 0.55
FN1-208ENST00000426059 ITGA4P13612 1032 aa18.47■□□□□ 0.55
FN1-208ENST00000426059 PRLRP16471 622 aa18.47■□□□□ 0.55
FN1-208ENST00000426059 TCP1P17987 556 aaKnown RBP18.47■□□□□ 0.55
FN1-208ENST00000426059 DENND1BQ6P3S1 775 aa18.47■□□□□ 0.55
FN1-208ENST00000426059 WDTC1Q8N5D0 677 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms