RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 CENPPQ6IPU0 288 aa18.26■□□□□ 0.51
CHCHD3-202ENST00000423635 MPZL3Q6UWV2 235 aa18.26■□□□□ 0.51
CHCHD3-202ENST00000423635 DNAJB7Q7Z6W7 309 aaPredicted RBP18.26■□□□□ 0.51
CHCHD3-202ENST00000423635 PIAS4Q8N2W9 510 aaPredicted RBP18.26■□□□□ 0.51
CHCHD3-202ENST00000423635 TCHPQ9BT92 498 aa18.26■□□□□ 0.51
CHCHD3-202ENST00000423635 RBM19Q9Y4C8 960 aaKnown RBP18.26■□□□□ 0.51
CHCHD3-202ENST00000423635 SPAG17Q6Q759 2223 aa18.26■□□□□ 0.51
CHCHD3-202ENST00000423635 CEP295Q9C0D2 2601 aa18.26■□□□□ 0.51
CHCHD3-202ENST00000423635 OR6C75A6NL08 312 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 CCDC169A6NNP5 214 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 OR52Z1P0C646 297 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 LRPAP1P30533 357 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 ALDH1A3P47895 512 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 AARSP49588 968 aaKnown RBP eCLIP18.25■□□□□ 0.514e-6■■■■■ 30.7
CHCHD3-202ENST00000423635 ORC2Q13416 577 aaPredicted RBP18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 ANKRD1Q15327 319 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 PKN3Q6P5Z2 889 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 BPIFB1Q8TDL5 484 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 PSMG2Q969U7 264 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 PGLYRP2Q96PD5 576 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 TMEM209Q96SK2 561 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 ATXN3LQ9H3M9 355 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 SH2B1Q9NRF2 756 aaPredicted RBP18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 VPS45Q9NRW7 570 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 ASPMQ8IZT6 3477 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 LAMA1P25391 3075 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 CITO14578 2027 aa18.25■□□□□ 0.51
CHCHD3-202ENST00000423635 ATG13O75143 517 aa18.24■□□□□ 0.51
CHCHD3-202ENST00000423635 OR4Q2P0C623 313 aa18.24■□□□□ 0.51
CHCHD3-202ENST00000423635 TNK2Q07912 1038 aa18.24■□□□□ 0.51
CHCHD3-202ENST00000423635 PTPAQ15257 358 aa18.24■□□□□ 0.51
CHCHD3-202ENST00000423635 ITPRIPL2Q3MIP1 535 aa18.24■□□□□ 0.51
CHCHD3-202ENST00000423635 TMEM196Q5HYL7 178 aa18.24■□□□□ 0.51
CHCHD3-202ENST00000423635 GPR158Q5T848 1215 aa18.24■□□□□ 0.51
CHCHD3-202ENST00000423635 DAW1Q8N136 415 aa18.24■□□□□ 0.51
CHCHD3-202ENST00000423635 CAMKK1Q8N5S9 505 aa18.24■□□□□ 0.51
CHCHD3-202ENST00000423635 NSUN7Q8NE18 718 aaKnown RBP18.24■□□□□ 0.51
CHCHD3-202ENST00000423635 NTPCRQ9BSD7 190 aaKnown RBP18.24■□□□□ 0.51
CHCHD3-202ENST00000423635 HSFX1Q9UBD0 423 aa18.24■□□□□ 0.51
CHCHD3-202ENST00000423635 TIMM13Q9Y5L4 95 aaPredicted RBP18.24■□□□□ 0.51
CHCHD3-202ENST00000423635 ATRXP46100 2492 aa18.24■□□□□ 0.51
CHCHD3-202ENST00000423635 CCDC192P0DO97 292 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 CCT6AP40227 531 aaKnown RBP18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 MPLP40238 635 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 PXNP49023 591 aaPredicted RBP18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 DMP1Q13316 513 aaPredicted RBP18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 TRIM29Q14134 588 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 MYBPC2Q14324 1141 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 ZBTB6Q15916 424 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 NECAB1Q8N987 351 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 KDF1Q8NAX2 398 aaPredicted RBP18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 GTF3C6Q969F1 213 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 ZBTB45Q96K62 511 aaPredicted RBP18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 TASP1Q9H6P5 420 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 C17orf75Q9HAS0 396 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 PLEKHA5Q9HAU0 1116 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 KMT5AQ9NQR1 393 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 THG1LQ9NWX6 298 aaKnown RBP18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 TUBGCP4Q9UGJ1 667 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 SLC8A2Q9UPR5 921 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 KIAA1024Q9UPX6 916 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 SLC27A5Q9Y2P5 690 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 ZZEF1O43149 2961 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 TRDMT1O14717 391 aaKnown RBP18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 TOM1L1O75674 476 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 GABRR2P28476 465 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 FXR2P51116 673 aaKnown RBP eCLIP18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 ZNF174Q15697 407 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 ME3Q16798 604 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 PLK5Q496M5 336 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 ARHGAP15Q53QZ3 475 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 RNF43Q68DV7 783 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 ATAD1Q8NBU5 361 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 FAM83CQ9BQN1 747 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 SMOC1Q9H4F8 434 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 ZMIZ1Q9ULJ6 1067 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 WASF3Q9UPY6 502 aa18.23■□□□□ 0.51
CHCHD3-202ENST00000423635 NUP210Q8TEM1 1887 aaPredicted RBP18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 MTMR11A4FU01 709 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 C1QTNF9BB2RNN3 333 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 HIP1RO75146 1068 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 PRAMEF12O95522 483 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 C1QTNF9P0C862 333 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 TYMPP19971 482 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 CYP3A5P20815 502 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 MCM2P49736 904 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 GRSF1Q12849 480 aaKnown RBP eCLIP18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 COL9A2Q14055 689 aaPredicted RBP18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 PDIA5Q14554 519 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 FSTL4Q6MZW2 842 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 PSAPL1Q6NUJ1 521 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 UNQ6494/PRO21346Q6UXR6 183 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 USP37Q86T82 979 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 ITIH5Q86UX2 942 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 DUSP15Q9H1R2 295 aaPredicted RBP18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 DDX19AQ9NUU7 478 aaKnown RBP18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 STK24Q9Y6E0 443 aa18.22■□□□□ 0.51
CHCHD3-202ENST00000423635 HARSP12081 509 aaKnown RBP18.21■□□□□ 0.51
CHCHD3-202ENST00000423635 MAPK7Q13164 816 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms