RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 RRAGAQ7L523 313 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 TAS1R1Q7RTX1 841 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 KAT5Q92993 513 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 ALG13Q9NP73 1137 aaKnown RBP16.85■□□□□ 0.29
DDX55-203ENST00000421670 AJAP1Q9UKB5 411 aaPredicted RBP16.85■□□□□ 0.29
DDX55-203ENST00000421670 L1RE1Q9UN81 338 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 EYSQ5T1H1 3165 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 A0A1W2PQC6 194 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 CARNS1A5YM72 827 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 M0QZQ0 153 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 TRAPPC3O43617 180 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 CSPG5O95196 566 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 EFEMP2O95967 443 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 ODC1P11926 461 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 TKTP29401 623 aaKnown RBP16.84■□□□□ 0.29
DDX55-203ENST00000421670 ZNF75DP51815 510 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 CDH8P55286 799 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 CUL2Q13617 745 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 SOWAHAQ2M3V2 549 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 CEP57Q86XR8 500 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 ARNTL2Q8WYA1 636 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 SDCBP2Q9H190 292 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 FHOD1Q9Y613 1164 aa16.84■□□□□ 0.29
DDX55-203ENST00000421670 C5orf67F2Z3F1 127 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 HUS1O60921 280 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 NOL4O94818 638 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 WEE2P0C1S8 567 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 P4HA1P13674 534 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 KCNA4P22459 653 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 KLHDC7AQ5VTJ3 777 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 WSCD1Q658N2 575 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 RNF168Q8IYW5 571 aaPredicted RBP16.83■□□□□ 0.28
DDX55-203ENST00000421670 PDCL2Q8N4E4 241 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 APPL2Q8NEU8 664 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 FBXO22Q8NEZ5 403 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 NEK11Q8NG66 645 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 KREMEN1Q96MU8 473 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 SAMD11Q96NU1 681 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 PLVAPQ9BX97 442 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 BCO2Q9BYV7 579 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 GANQ9H2C0 597 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 UBE2TQ9NPD8 197 aaPredicted RBP16.83■□□□□ 0.28
DDX55-203ENST00000421670 PLCB1Q9NQ66 1216 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 PCDHB8Q9UN66 801 aa16.83■□□□□ 0.28
DDX55-203ENST00000421670 UCHL3P15374 230 aa16.82■□□□□ 0.28
DDX55-203ENST00000421670 CD58P19256 250 aa16.82■□□□□ 0.28
DDX55-203ENST00000421670 PLCB3Q01970 1234 aa16.82■□□□□ 0.28
DDX55-203ENST00000421670 KRT17Q04695 432 aa16.82■□□□□ 0.28
DDX55-203ENST00000421670 ELAVL2Q12926 359 aaKnown RBP16.82■□□□□ 0.28
DDX55-203ENST00000421670 RTP2Q5QGT7 225 aa16.82■□□□□ 0.28
DDX55-203ENST00000421670 IQCEQ6IPM2 695 aa16.82■□□□□ 0.28
DDX55-203ENST00000421670 DDX53Q86TM3 631 aaKnown RBP16.82■□□□□ 0.28
DDX55-203ENST00000421670 ADGRF2Q8IZF7 708 aa16.82■□□□□ 0.28
DDX55-203ENST00000421670 TOP6BLQ8N6T0 577 aa16.82■□□□□ 0.28
DDX55-203ENST00000421670 KBTBD7Q8WVZ9 684 aa16.82■□□□□ 0.28
DDX55-203ENST00000421670 MRPL45Q9BRJ2 306 aaKnown RBP16.82■□□□□ 0.28
DDX55-203ENST00000421670 C11orf84Q9BUA3 381 aaPredicted RBP16.82■□□□□ 0.28
DDX55-203ENST00000421670 MYO7AQ13402 2215 aa16.82■□□□□ 0.28
DDX55-203ENST00000421670 EPOPA6NHQ4 379 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 SOX1O00570 391 aaPredicted RBP16.81■□□□□ 0.28
DDX55-203ENST00000421670 HCRTO43612 131 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 SOD2P04179 222 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 TRIM21P19474 475 aaKnown RBP16.81■□□□□ 0.28
DDX55-203ENST00000421670 FGFR3P22607 806 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 PAX3P23760 479 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 TBXAS1P24557 533 aaPredicted RBP16.81■□□□□ 0.28
DDX55-203ENST00000421670 DNAJB1P25685 340 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 POLR2FP61218 127 aaKnown RBP16.81■□□□□ 0.28
DDX55-203ENST00000421670 GCNT1Q02742 428 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 RAPGEF1Q13905 1077 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 ARHGAP44Q17R89 818 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.81■□□□□ 0.28
DDX55-203ENST00000421670 LIMS2Q7Z4I7 341 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 VSTM4Q8IW00 320 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 VPS52Q8N1B4 723 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 GDPD5Q8WTR4 605 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 HERC2P3Q9BVR0 1158 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 NLRC4Q9NPP4 1024 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 HMGXB4Q9UGU5 601 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 DNAJC12Q9UKB3 198 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 PLXNA3P51805 1871 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 MYH10P35580 1976 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 C2CD2LO14523 706 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 SYN3O14994 580 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 GRM6O15303 877 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 ADCY5O95622 1261 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 CYP11A1P05108 521 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 RB1P06400 928 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 PNMA6AP0CW24 399 aaPredicted RBP16.81■□□□□ 0.28
DDX55-203ENST00000421670 USP41Q3LFD5 358 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 VARS2Q5ST30 1063 aaKnown RBP16.81■□□□□ 0.28
DDX55-203ENST00000421670 OSTM1Q86WC4 334 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 SPPL3Q8TCT6 385 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 AUTS2Q8WXX7 1259 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 MRFAP1L1Q96HT8 127 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 TTPALQ9BTX7 342 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 CISHQ9NSE2 258 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 NME7Q9Y5B8 376 aa16.81■□□□□ 0.28
DDX55-203ENST00000421670 PTPRDP23468 1912 aa16.8■□□□□ 0.28
DDX55-203ENST00000421670 TACC1O75410 805 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms