RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 NFKBIAP25963 317 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 NFX1Q12986 1120 aaKnown RBP12.91□□□□□ -0.34
CLCN4-203ENST00000421085 KIZQ2M2Z5 673 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 KLHDC7AQ5VTJ3 777 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 PPIL6Q8IXY8 311 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 SPATA18Q8TC71 538 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 STMN3Q9NZ72 180 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 PAK5Q9P286 719 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 USP21Q9UK80 565 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 FAM32AQ9Y421 112 aaKnown RBP12.91□□□□□ -0.34
CLCN4-203ENST00000421085 TRIM49D1C9J1S8 452 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 EFCAB14O75071 495 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 RALAP11233 206 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 FDPSP14324 419 aaKnown RBP12.91□□□□□ -0.34
CLCN4-203ENST00000421085 TPI1P60174 286 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 MEI1Q5TIA1 1274 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 MTDHQ86UE4 582 aaKnown RBP12.91□□□□□ -0.34
CLCN4-203ENST00000421085 P3H2Q8IVL5 708 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 CASP10Q92851 521 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 ERGIC2Q96RQ1 377 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 C2orf40Q9H1Z8 148 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 FAM95CA0A1B0GW59 222 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 SULT1E1P49888 294 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 UGP2Q16851 508 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 GJB7Q6PEY0 223 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 IYDQ6PHW0 289 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 HEATR4Q86WZ0 1026 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 TSPAN17Q96FV3 270 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 OTUB1Q96FW1 271 aaPredicted RBP12.91□□□□□ -0.34
CLCN4-203ENST00000421085 TMEM245Q9H330 911 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 CFAP74Q9C0B2 1584 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 CTDNEP1O95476 244 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 NUP107P57740 925 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 EPHA7Q15375 998 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 TTC39CQ8N584 583 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 MRGBPQ9NV56 204 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 CAPN6Q9Y6Q1 641 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 YWHABP31946 246 aaKnown RBP12.91□□□□□ -0.34
CLCN4-203ENST00000421085 SERPINB5P36952 375 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 GRIN1Q05586 938 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 OASLQ15646 514 aaKnown RBP12.91□□□□□ -0.34
CLCN4-203ENST00000421085 PAPD7Q5XG87 772 aaKnown RBP12.91□□□□□ -0.34
CLCN4-203ENST00000421085 TUBGCP3Q96CW5 907 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 DNAJC7Q99615 494 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 COA1Q9GZY4 146 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 GPBP1L1Q9HC44 474 aaPredicted RBP12.91□□□□□ -0.34
CLCN4-203ENST00000421085 MINPP1Q9UNW1 487 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 MED14O60244 1454 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 KCNK10P57789 538 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 SLC13A5Q86YT5 568 aaPredicted RBP12.9□□□□□ -0.34
CLCN4-203ENST00000421085 NLGN1Q8N2Q7 840 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 AP3B1O00203 1094 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 CALB2P22676 271 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 SMTNL2Q2TAL5 461 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 PLEKHA7Q6IQ23 1121 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 FAM71DQ8N9W8 422 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 RNPEPQ9H4A4 650 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 RXFP1Q9HBX9 757 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 USP42Q9H9J4 1324 aaKnown RBP12.9□□□□□ -0.34
CLCN4-203ENST00000421085 PRPF4O43172 522 aaKnown RBP eCLIP12.9□□□□□ -0.34
CLCN4-203ENST00000421085 FNTAP49354 379 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 EDRF1Q3B7T1 1238 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 ASAP3Q8TDY4 903 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 SYBUQ9NX95 663 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 NSMCE4AQ9NXX6 385 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 CST8O60676 142 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 POLBP06746 335 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 LRRC74AQ0VAA2 488 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 RBBP8NLQ8NC74 664 aaPredicted RBP12.9□□□□□ -0.34
CLCN4-203ENST00000421085 PIGBQ92521 554 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 ASIC4Q96FT7 647 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 AGBL1Q96MI9 1066 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 THAP2Q9H0W7 228 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 PLEKHA5Q9HAU0 1116 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 LAMC1P11047 1609 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 OCM2P0CE71 109 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 OCMP0CE72 109 aaPredicted RBP12.9□□□□□ -0.34
CLCN4-203ENST00000421085 PSMA4P25789 261 aaKnown RBP12.9□□□□□ -0.34
CLCN4-203ENST00000421085 CRKP46108 304 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 RGS7P49802 495 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 LUZP2Q86TE4 346 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 USP33Q8TEY7 942 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 AFG1LQ8WV93 481 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 MPP4Q96JB8 637 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 SPON2Q9BUD6 331 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 SNX13Q9Y5W8 968 aa12.9□□□□□ -0.34
CLCN4-203ENST00000421085 SMAPO00193 183 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 AP5Z1O43299 807 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 NBNO60934 754 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 ZNF189O75820 626 aaPredicted RBP12.89□□□□□ -0.35
CLCN4-203ENST00000421085 GHRP10912 638 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 TBL3Q12788 808 aaKnown RBP12.89□□□□□ -0.35
CLCN4-203ENST00000421085 SNRNP35Q16560 246 aaKnown RBP12.89□□□□□ -0.35
CLCN4-203ENST00000421085 WDR72Q3MJ13 1102 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 DCAF4L1Q3SXM0 396 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 FOXR1Q6PIV2 292 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 TTC30BQ8N4P2 665 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 PNPLA7Q6ZV29 1317 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 ADGRA2Q96PE1 1338 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms