RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 DSG3P32926 999 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 NAMPTP43490 491 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 LBRQ14739 615 aaKnown RBP8.87□□□□□ -0.99
UBR4-206ENST00000419533 PCNX4Q63HM2 1172 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 MTHFD1LQ6UB35 978 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 ZBED8Q8IZ13 594 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 CPA5Q8WXQ8 436 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 HPS3Q969F9 1004 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 KLRG1Q96E93 195 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 WDR18Q9BV38 432 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 SUDS3Q9H7L9 328 aaPredicted RBP8.87□□□□□ -0.99
UBR4-206ENST00000419533 DPP7Q9UHL4 492 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 DOLKQ9UPQ8 538 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 CFAP69A5D8W1 941 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 CFLARO15519 480 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 CAPN15O75808 1086 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 PGK2P07205 417 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 CYP2C8P10632 490 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 SLC2A3P11169 496 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 ESRRAP11474 423 aaPredicted RBP8.87□□□□□ -0.99
UBR4-206ENST00000419533 NPEPPSP55786 919 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 SH3BGRP55822 239 aaPredicted RBP8.87□□□□□ -0.99
UBR4-206ENST00000419533 HABP4Q5JVS0 413 aaKnown RBP8.87□□□□□ -0.99
UBR4-206ENST00000419533 IZUMO3Q5VZ72 239 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 MMS22LQ6ZRQ5 1243 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 EPM2AIP1Q7L775 607 aaPredicted RBP8.87□□□□□ -0.99
UBR4-206ENST00000419533 ATL2Q8NHH9 583 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 SLC7A14Q8TBB6 771 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 TRAIPQ9BWF2 469 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 FAM49BQ9NUQ9 324 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 KCNN4O15554 427 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 DCTN3O75935 186 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 UCHL3P15374 230 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 MAP4P27816 1152 aaKnown RBP8.87□□□□□ -0.99
UBR4-206ENST00000419533 IFT88Q13099 833 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 CASP8Q14790 479 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 C10orf120Q5SQS8 335 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 ANKS3Q6ZW76 656 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 TBC1D1Q86TI0 1168 aaPredicted RBP8.87□□□□□ -0.99
UBR4-206ENST00000419533 FBXO16Q8IX29 292 aaPredicted RBP8.87□□□□□ -0.99
UBR4-206ENST00000419533 ZNF784Q8NCA9 323 aaPredicted RBP8.87□□□□□ -0.99
UBR4-206ENST00000419533 TARS2Q9BW92 718 aaKnown RBP8.87□□□□□ -0.99
UBR4-206ENST00000419533 NAGPAQ9UK23 515 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 ATP9BO43861 1147 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 ARSEP51690 589 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 SLC18A3Q16572 532 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 CYP4A22Q5TCH4 519 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 ICE2Q659A1 982 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 ZNF467Q7Z7K2 595 aaPredicted RBP8.87□□□□□ -0.99
UBR4-206ENST00000419533 CCNYL1Q8N7R7 359 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 NCLNQ969V3 563 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 SPATC1LQ9H0A9 340 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 ABCB6Q9NP58 842 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 ENTPD7Q9NQZ7 604 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 FAM198AQ9UFP1 575 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 DSEQ9UL01 958 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 L3MBTL1Q9Y468 752 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 ADGRG1Q9Y653 693 aa8.87□□□□□ -0.99
UBR4-206ENST00000419533 MORC2Q9Y6X9 1032 aaPredicted RBP8.87□□□□□ -0.99
UBR4-206ENST00000419533 SSU72P8A0A1W2PR75 194 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 HIST1H2AGP0C0S8 130 aaPredicted RBP8.86□□□□□ -0.99
UBR4-206ENST00000419533 HIST1H2ADP20671 130 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 SREBF1P36956 1147 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 MAGEA9P43362 315 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 ARL4DP49703 201 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 RBBP7Q16576 425 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 MEI1Q5TIA1 1274 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 NFRKBQ6P4R8 1299 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 ATP6V0D2Q8N8Y2 350 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 HIST1H2AHQ96KK5 128 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 MCEEQ96PE7 176 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 HIST1H2AJQ99878 128 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 H2AFJQ9BTM1 129 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 PITPNM3Q9BZ71 974 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 MRPL40Q9NQ50 206 aaKnown RBP8.86□□□□□ -0.99
UBR4-206ENST00000419533 PXMP2Q9NR77 195 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 OGTO15294 1046 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 ADCY3O60266 1144 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 RALBP11234 206 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 GPD1P21695 349 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 AP1ARQ63HQ0 302 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 C1orf54Q8WWF1 131 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 YME1L1Q96TA2 773 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.86□□□□□ -0.99
UBR4-206ENST00000419533 ITIH6Q6UXX5 1313 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 NCK2O43639 380 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 CHGBP05060 677 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 ITGB3P05106 788 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 URODP06132 367 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 TROAPQ12815 778 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 MPZL3Q6UWV2 235 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 CHSY1Q86X52 802 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 SCFD1Q8WVM8 642 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 PABPC5Q96DU9 382 aaKnown RBP8.86□□□□□ -0.99
UBR4-206ENST00000419533 TEX12Q9BXU0 123 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 RNF208Q9H0X6 261 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 TMEM60Q9H2L4 133 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 SLC30A1Q9Y6M5 507 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 SLC15A5A6NIM6 579 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 TYK2P29597 1187 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms