RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 CPSF3Q9UKF6 684 aaKnown RBP13.76□□□□□ -0.21
LINC00642-201ENST00000419459 TFR2Q9UP52 801 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 PCDHA13Q9Y5I0 950 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 GRID2IPA4D2P6 1211 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 GNA14O95837 355 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 MDH1P40925 334 aaKnown RBP13.76□□□□□ -0.21
LINC00642-201ENST00000419459 CDR1P51861 262 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 MARSP56192 900 aaKnown RBP13.76□□□□□ -0.21
LINC00642-201ENST00000419459 KCNH2Q12809 1159 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 PCBP1Q15365 356 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC00642-201ENST00000419459 CBWD6Q4V339 395 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 CBWD3Q5JTY5 395 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 CBWD5Q5RIA9 395 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 SCARA3Q6AZY7 606 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 FRMD5Q7Z6J6 570 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 RNF169Q8NCN4 708 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 PARD3BQ8TEW8 1205 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 TMEM174Q8WUU8 243 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 ELMO3Q96BJ8 720 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 ATP6V1G3Q96LB4 118 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 MKNK1Q9BUB5 465 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 NDST4Q9H3R1 872 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC00642-201ENST00000419459 KLK14Q9P0G3 267 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 IPPQ9Y573 584 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 CAPN6Q9Y6Q1 641 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 EYSQ5T1H1 3165 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 MYO1FO00160 1098 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 LRRN2O75325 713 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 MCF2P10911 925 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 CSF2RAP15509 400 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 AXLP30530 894 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 GCLMP48507 274 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 VAMP7P51809 220 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 PPP3CAQ08209 521 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 MYBPC2Q14324 1141 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 MAN2A1Q16706 1144 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 GLRA4Q5JXX5 417 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 C1orf220Q5T0J3 134 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 C6orf89Q6UWU4 347 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 LRIG3Q6UXM1 1119 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 INTS8Q75QN2 995 aaKnown RBP13.75□□□□□ -0.21
LINC00642-201ENST00000419459 NLRP14Q86W24 1093 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 SMG8Q8ND04 991 aaKnown RBP13.75□□□□□ -0.21
LINC00642-201ENST00000419459 MYCBPAPQ8TBZ2 947 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 LINC01599Q8WXQ3 324 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 RNPC3Q96LT9 517 aaKnown RBP13.75□□□□□ -0.21
LINC00642-201ENST00000419459 FAM105AQ9NUU6 356 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 MCM8Q9UJA3 840 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 SUFUQ9UMX1 484 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 PCDHB2Q9Y5E7 798 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 DUSP10Q9Y6W6 482 aa13.75□□□□□ -0.21
LINC00642-201ENST00000419459 ZNF263O14978 683 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 RECQL4O94761 1208 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 LDHAP00338 332 aaKnown RBP13.74□□□□□ -0.21
LINC00642-201ENST00000419459 SYN1P17600 705 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 KLK7P49862 253 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 AFF1P51825 1210 aaKnown RBP13.74□□□□□ -0.21
LINC00642-201ENST00000419459 KIF11P52732 1056 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 VWA3BQ502W6 1294 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 RTN4RL1Q86UN2 441 aaPredicted RBP13.74□□□□□ -0.21
LINC00642-201ENST00000419459 C7orf61Q8IZ16 206 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 USP38Q8NB14 1042 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 VWCEQ96DN2 955 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 CCT8L2Q96SF2 557 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 EDEM3Q9BZQ6 932 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 MICAL3Q7RTP6 2002 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 KRT13P13646 458 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 RAG1P15918 1043 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 TNNI1P19237 187 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 CYP27A1Q02318 531 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 IFFO1Q0D2I5 559 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 SLC10A6Q3KNW5 377 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 DCAF4L1Q3SXM0 396 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 PLEKHG4Q58EX7 1191 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 BRSK2Q8IWQ3 736 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 CCDC13Q8IYE1 715 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 MFSD14AQ96MC6 490 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 ZFP42Q96MM3 310 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 FNBP1Q96RU3 617 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 RPF1Q9H9Y2 349 aaKnown RBP13.74□□□□□ -0.21
LINC00642-201ENST00000419459 METTL14Q9HCE5 456 aaKnown RBP13.74□□□□□ -0.21
LINC00642-201ENST00000419459 RALGAPA2Q2PPJ7 1873 aa13.74□□□□□ -0.21
LINC00642-201ENST00000419459 CHD9Q3L8U1 2897 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 KRT14P02533 472 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 NFICP08651 508 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 ATF7P17544 494 aaPredicted RBP13.73□□□□□ -0.21
LINC00642-201ENST00000419459 ELF1P32519 619 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 SLC7A5Q01650 507 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 CEP85LQ5SZL2 805 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 TTC19Q6DKK2 380 aaPredicted RBP13.73□□□□□ -0.21
LINC00642-201ENST00000419459 OR5B17Q8NGF7 314 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 ZNF516Q92618 1163 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 PCMTD1Q96MG8 357 aaPredicted RBP13.73□□□□□ -0.21
LINC00642-201ENST00000419459 ACAP3Q96P50 834 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 NOX5Q96PH1 765 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 MTMR12Q9C0I1 747 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 KIAA1586Q9HCI6 787 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 LUC7LQ9NQ29 371 aaKnown RBP13.73□□□□□ -0.21
LINC00642-201ENST00000419459 PARP2Q9UGN5 583 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms