RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 DBF4Q9UBU7 674 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 APOBEC2Q9Y235 224 aaKnown RBP4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 THRAP3Q9Y2W1 955 aaKnown RBP4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 SPATA31A1Q5TZJ5 1347 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 AK9Q5TCS8 1911 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 ATP10DQ9P241 1426 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 COL5A3P25940 1745 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 KAT6BQ8WYB5 2073 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 BTAF1O14981 1849 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 SBF2Q86WG5 1849 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 TLDC2A0PJX2 215 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 TMEM191CA6NGB0 347 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 GRXCR1A8MXD5 290 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 EXOC5O00471 708 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 TMEM127O75204 238 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 HMMRO75330 724 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 ABHD16AO95870 558 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 SNRPA1P09661 255 aaKnown RBP4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 PTTG1IPP53801 180 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 INHBEP58166 350 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 MEF2AQ02078 507 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 PTPAQ15257 358 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 FSCN1Q16658 493 aaKnown RBP4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 LY6G5CQ5SRR4 150 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 IQSEC1Q6DN90 963 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 G2E3Q7L622 706 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 STRA8Q7Z7C7 330 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 MRGPREQ86SM8 312 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 RNF180Q86T96 592 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 RNF169Q8NCN4 708 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 OR10H5Q8NGA6 315 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 CHAC2Q8WUX2 184 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 SNX33Q8WV41 574 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 ACAP3Q96P50 834 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 PRRX2Q99811 253 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 PDCD2LQ9BRP1 358 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 QRSL1Q9H0R6 528 aaKnown RBP4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 KCNH6Q9H252 994 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 CAAP1Q9H8G2 361 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 DDX21Q9NR30 783 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 ZBTB40Q9NUA8 1239 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 HYPKQ9NX55 129 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 SPATA31A5Q5VU36 1347 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 SPATA31A7Q8IWB4 1347 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 ZNF831Q5JPB2 1677 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 RREB1Q92766 1687 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 BCORQ6W2J9 1755 aa4.63□□□□□ -1.67
HMGB3P20-201ENST00000417997 GOLGA8AA7E2F4 631 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 AKR1B10O60218 316 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 IGHDP01880 384 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 ANXA1P04083 346 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 ITGB1P05556 798 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 GNAI3P08754 354 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 UBTFL1P0CB47 393 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 MYL6BP14649 208 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 ENPP1P22413 925 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 NR4A1P22736 598 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 CTSSP25774 331 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 CNGA1P29973 690 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 ADSLP30566 484 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 PTPN7P35236 360 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 SCAND1P57086 179 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 RNASE9P60153 205 aaKnown RBP4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 NEXNQ0ZGT2 675 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 AIMP1Q12904 312 aaKnown RBP4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 HDAC1Q13547 482 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 SMN1Q16637 294 aaKnown RBP4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 C19orf54Q5BKX5 351 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 ANKS6Q68DC2 871 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 EFCAB12Q6NXP0 572 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 GIMAP6Q6P9H5 292 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 PDZD4Q76G19 769 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 DOK3Q7L591 496 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 UNC5CLQ8IV45 518 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 VRK3Q8IV63 474 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 SLC41A1Q8IVJ1 513 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 ULK2Q8IYT8 1036 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 RPUSD2Q8IZ73 545 aaKnown RBP4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 ZNF480Q8WV37 535 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 DNAAF4Q8WXU2 420 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 TFAP2CQ92754 450 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 LENG9Q96B70 501 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 GCC1Q96CN9 775 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 RAX2Q96IS3 184 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 MEIS3Q99687 375 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 MLST8Q9BVC4 326 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 GPRC5DQ9NZD1 345 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 FZD1Q9UP38 647 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 CLCA2Q9UQC9 943 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 DMRT1Q9Y5R6 373 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 LAMB2P55268 1798 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 BRWD3Q6RI45 1802 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 ADCY9O60503 1353 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 BCL9O00512 1426 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 MYH3P11055 1940 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 BCL9LQ86UU0 1499 aa4.62□□□□□ -1.67
HMGB3P20-201ENST00000417997 SCN7AQ01118 1682 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 LY75O60449 1722 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 CASZ1Q86V15 1759 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 NUP98P52948 1817 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms