RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 SNTG2Q9NY99 539 aa17.88■□□□□ 0.45
SSBP3-205ENST00000417664 PIN4Q9Y237 131 aaKnown RBP17.88■□□□□ 0.45
SSBP3-205ENST00000417664 AOC2O75106 756 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 PGK1P00558 417 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 CALB1P05937 261 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 COMTP21964 271 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 MMP8P22894 467 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 CTNNA2P26232 953 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 VSNL1P62760 191 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 MRPS6P82932 125 aaKnown RBP17.87■□□□□ 0.45
SSBP3-205ENST00000417664 C8orf74Q6P047 294 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 CXCL17Q6UXB2 119 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 SCARA5Q6ZMJ2 495 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 LRRC52Q8N7C0 313 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 PCSK9Q8NBP7 692 aaKnown RBP17.87■□□□□ 0.45
SSBP3-205ENST00000417664 KLHDC9Q8NEP7 349 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 TMEM40Q8WWA1 233 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 CD101Q93033 1021 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 EIF2AQ9BY44 585 aaKnown RBP17.87■□□□□ 0.45
SSBP3-205ENST00000417664 SRRDQ9UH36 339 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 KIAA1257Q9ULG3 409 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 POLIQ9UNA4 740 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 TRIP12Q14669 1992 aaPredicted RBP17.87■□□□□ 0.45
SSBP3-205ENST00000417664 MYO1FO00160 1098 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 ATMINO43313 823 aaPredicted RBP17.87■□□□□ 0.45
SSBP3-205ENST00000417664 CILPO75339 1184 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 CALCAP01258 141 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 RRM1P23921 792 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 INCA1Q0VD86 236 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 XKR4Q5GH76 650 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 PLEKHA7Q6IQ23 1121 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 ZSWIM1Q9BR11 485 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 PLVAPQ9BX97 442 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 PARVAQ9NVD7 372 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 ZNF446Q9NWS9 450 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 EHD2Q9NZN4 543 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 ANAPC7Q9UJX3 599 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 UBQLN1Q9UMX0 589 aaKnown RBP17.87■□□□□ 0.45
SSBP3-205ENST00000417664 NOC2LQ9Y3T9 749 aaKnown RBP17.87■□□□□ 0.45
SSBP3-205ENST00000417664 TRPV2Q9Y5S1 764 aa17.87■□□□□ 0.45
SSBP3-205ENST00000417664 SPOPO43791 374 aa17.86■□□□□ 0.45
SSBP3-205ENST00000417664 RECQL4O94761 1208 aa17.86■□□□□ 0.45
SSBP3-205ENST00000417664 CD4P01730 458 aa17.86■□□□□ 0.45
SSBP3-205ENST00000417664 HSPA6P17066 643 aa17.86■□□□□ 0.45
SSBP3-205ENST00000417664 ATF7P17544 494 aaPredicted RBP17.86■□□□□ 0.45
SSBP3-205ENST00000417664 CTNNA1P35221 906 aaKnown RBP17.86■□□□□ 0.45
SSBP3-205ENST00000417664 PTP4A2Q12974 167 aa17.86■□□□□ 0.45
SSBP3-205ENST00000417664 SERINC5Q86VE9 423 aa17.86■□□□□ 0.45
SSBP3-205ENST00000417664 PPP1R13LQ8WUF5 828 aa17.86■□□□□ 0.45
SSBP3-205ENST00000417664 SMARCAL1Q9NZC9 954 aa17.86■□□□□ 0.45
SSBP3-205ENST00000417664 BARX2Q9UMQ3 279 aaPredicted RBP17.86■□□□□ 0.45
SSBP3-205ENST00000417664 PCDHA3Q9Y5H8 950 aa17.86■□□□□ 0.45
SSBP3-205ENST00000417664 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.86■□□□□ 0.45
SSBP3-205ENST00000417664 TLR3O15455 904 aaKnown RBP17.85■□□□□ 0.45
SSBP3-205ENST00000417664 CABYRO75952 493 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 HMGCRP04035 888 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 PRKAR2AP13861 404 aaKnown RBP17.85■□□□□ 0.45
SSBP3-205ENST00000417664 KCNE1P15382 129 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 BRD2P25440 801 aaKnown RBP17.85■□□□□ 0.45
SSBP3-205ENST00000417664 RAD23BP54727 409 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 TAP1Q03518 808 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 LONRF2Q1L5Z9 754 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 ZNF394Q53GI3 561 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 BEND6Q5SZJ8 279 aaPredicted RBP17.85■□□□□ 0.45
SSBP3-205ENST00000417664 PASD1Q8IV76 773 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 TMEM176AQ96HP8 235 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 RNPC3Q96LT9 517 aaKnown RBP17.85■□□□□ 0.45
SSBP3-205ENST00000417664 C11orf70Q9BRQ4 267 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 LRRC1Q9BTT6 524 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 NXF3Q9H4D5 531 aaKnown RBP17.85■□□□□ 0.45
SSBP3-205ENST00000417664 CHST12Q9NRB3 414 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 RNF186Q9NXI6 227 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 STIM2Q9P246 746 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 STRIP2Q9ULQ0 834 aa17.85■□□□□ 0.45
SSBP3-205ENST00000417664 ASGR1P07306 291 aa17.84■□□□□ 0.45
SSBP3-205ENST00000417664 CFHP08603 1231 aa17.84■□□□□ 0.45
SSBP3-205ENST00000417664 CYP3A5P20815 502 aa17.84■□□□□ 0.45
SSBP3-205ENST00000417664 TNFRSF8P28908 595 aa17.84■□□□□ 0.45
SSBP3-205ENST00000417664 MAP2K2P36507 400 aa17.84■□□□□ 0.45
SSBP3-205ENST00000417664 PEX5P50542 639 aa17.84■□□□□ 0.45
SSBP3-205ENST00000417664 PTPN11Q06124 597 aaPredicted RBP17.84■□□□□ 0.45
SSBP3-205ENST00000417664 MAMLD1Q13495 774 aa17.84■□□□□ 0.45
SSBP3-205ENST00000417664 STILQ15468 1287 aa17.84■□□□□ 0.45
SSBP3-205ENST00000417664 UBXN11Q5T124 520 aa17.84■□□□□ 0.45
SSBP3-205ENST00000417664 MAP3K21Q5TCX8 1036 aa17.84■□□□□ 0.45
SSBP3-205ENST00000417664 CCSAPQ6IQ19 270 aaPredicted RBP17.84■□□□□ 0.45
SSBP3-205ENST00000417664 GDF6Q6KF10 455 aaPredicted RBP17.84■□□□□ 0.45
SSBP3-205ENST00000417664 PXYLP1Q8TE99 480 aa17.84■□□□□ 0.45
SSBP3-205ENST00000417664 SDCBP2Q9H190 292 aa17.84■□□□□ 0.45
SSBP3-205ENST00000417664 SMYD3Q9H7B4 428 aa17.84■□□□□ 0.45
SSBP3-205ENST00000417664 CDY2AQ9Y6F7 541 aa17.84■□□□□ 0.45
SSBP3-205ENST00000417664 TMEM110-MUSTN1A8MSY1 372 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 KRIT1O00522 736 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 VDRP11473 427 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 CD19P15391 556 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 MAN1A1P33908 653 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 PNPLA4P41247 253 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 TRIM32Q13049 653 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 KCNA10Q16322 511 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 PTPROQ16827 1216 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms