RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 LRRTM3Q86VH5 581 aa13.5□□□□□ -0.25
NCKIPSD-203ENST00000415281 GPIHBP1Q8IV16 184 aa13.5□□□□□ -0.25
NCKIPSD-203ENST00000415281 DCLK2Q8N568 766 aa13.5□□□□□ -0.25
NCKIPSD-203ENST00000415281 SHDQ96IW2 340 aa13.5□□□□□ -0.25
NCKIPSD-203ENST00000415281 CDK5RAP3Q96JB5 506 aa13.5□□□□□ -0.25
NCKIPSD-203ENST00000415281 SENP8Q96LD8 212 aa13.5□□□□□ -0.25
NCKIPSD-203ENST00000415281 CLIC6Q96NY7 704 aa13.5□□□□□ -0.25
NCKIPSD-203ENST00000415281 PARVGQ9HBI0 331 aa13.5□□□□□ -0.25
NCKIPSD-203ENST00000415281 MAFFQ9ULX9 164 aa13.5□□□□□ -0.25
NCKIPSD-203ENST00000415281 YIPF1Q9Y548 306 aa13.5□□□□□ -0.25
NCKIPSD-203ENST00000415281 GPR179Q6PRD1 2367 aa13.5□□□□□ -0.25
NCKIPSD-203ENST00000415281 CACNA1AO00555 2505 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 TCHHQ07283 1943 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 OBSL1O75147 1896 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 NUP210Q8TEM1 1887 aaPredicted RBP13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 A0A087X0B3 334 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 MTMR11A4FU01 709 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 MYMKA6NI61 221 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 K7ENM7 598 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 HNRNPDLO14979 420 aaKnown RBP13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 LMNAP02545 664 aaKnown RBP13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 CYP11A1P05108 521 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 MYL4P12829 197 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 TYMPP19971 482 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 LIG4P49917 911 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 GAS6Q14393 721 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 UBXN2BQ14CS0 331 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 ZNF528Q3MIS6 628 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 TSSK4Q6SA08 328 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 GAREM2Q75VX8 874 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 PDZD4Q76G19 769 aaPredicted RBP13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 EFCAB13Q8IY85 973 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 ATAD1Q8NBU5 361 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 CXorf38Q8TB03 319 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 LARP4BQ92615 738 aaKnown RBP13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 SMARCD2Q92925 531 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 CALML4Q96GE6 196 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 FAM84AQ96KN4 292 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 ZNF512Q96ME7 567 aaPredicted RBP13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 MSTO1Q9BUK6 570 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 FGFBP2Q9BYJ0 223 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 TRPV5Q9NQA5 729 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 F5P12259 2224 aa13.49□□□□□ -0.25
NCKIPSD-203ENST00000415281 H0YCG3 227 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 ZNF197O14709 1029 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 LILRB5O75023 590 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 FAM13AO94988 1023 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 CPB1P15086 417 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 MARCKSP29966 332 aaPredicted RBP13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 HOXC13P31276 330 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 MATR3P43243 847 aaKnown RBP eCLIP13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 CASP5P51878 434 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 PFKPQ01813 784 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 CEBPZQ03701 1054 aaKnown RBP13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 PPP2R3AQ06190 1150 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 BECN1Q14457 450 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 DSTYKQ6XUX3 929 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 DYMQ7RTS9 669 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 ZBTB44Q8NCP5 570 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 DNASE1L2Q92874 299 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 BICD1Q96G01 975 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 TSPAN18Q96SJ8 248 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 SEMA4AQ9H3S1 761 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 RPF1Q9H9Y2 349 aaKnown RBP13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 IL21Q9HBE4 155 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 ZFP14Q9HCL3 533 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 FBXO4Q9UKT5 387 aa13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 SRPRBQ9Y5M8 271 aaKnown RBP13.48□□□□□ -0.25
NCKIPSD-203ENST00000415281 A0A1W2PRU2 124 aa13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 OR6C75A6NL08 312 aa13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 ATF6P18850 670 aa13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 RPS9P46781 194 aaKnown RBP13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 MTAPQ13126 283 aa13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 MYBPC2Q14324 1141 aa13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 FOXD4L6Q3SYB3 417 aaPredicted RBP13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 CYP4A22Q5TCH4 519 aa13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 OVOS1Q6IE37 1185 aa13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 FOXD4L3Q6VB84 417 aaPredicted RBP13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 DNAJB7Q7Z6W7 309 aaPredicted RBP13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 SFR1Q86XK3 245 aa13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 MFSD6LQ8IWD5 586 aa13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 ZSCAN18Q8TBC5 510 aaPredicted RBP13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 FAM212AQ96EL1 285 aa13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 TRMT61BQ9BVS5 477 aaKnown RBP13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 BCO2Q9BYV7 579 aa13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 ZCWPW1Q9H0M4 648 aa13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 ZSCAN16Q9H4T2 348 aaPredicted RBP13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 SPATA6Q9NWH7 488 aaPredicted RBP13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 DERAQ9Y315 318 aa13.47□□□□□ -0.25
NCKIPSD-203ENST00000415281 HEPACAM2A8MVW5 462 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 CHRNB1P11230 501 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 PSMC3P17980 439 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 SCP2P22307 547 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 RFX1P22670 979 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 TGM1P22735 817 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 GDI1P31150 447 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 CSTF1Q05048 431 aaKnown RBP13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 PKP1Q13835 747 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 KYAT1Q16773 422 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 ADALQ6DHV7 355 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms