RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 HPSEQ9Y251 543 aa16.95■□□□□ 0.3
MCF2L-211ENST00000413354 KMT2EQ8IZD2 1858 aa16.95■□□□□ 0.3
MCF2L-211ENST00000413354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-211ENST00000413354 A0A1W2PQ27 194 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 A0A1W2PQ64 194 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 A0A1W2PQD8 194 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 CYB561D2O14569 222 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 SPTLC1O15269 473 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 CASP1P29466 404 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 GPR17Q13304 367 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 MTSS1LQ765P7 747 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 GRAMD1CQ8IYS0 662 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 THEM5Q8N1Q8 247 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 FBXL6Q8N531 539 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 LRRC52Q8N7C0 313 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 ZSWIM2Q8NEG5 633 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 GOLGA5Q8TBA6 731 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 SCFD1Q8WVM8 642 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 CCDC47Q96A33 483 aaKnown RBP16.94■□□□□ 0.3
MCF2L-211ENST00000413354 CCDC34Q96HJ3 373 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 AGPAT3Q9NRZ7 376 aa16.94■□□□□ 0.3
MCF2L-211ENST00000413354 DNMT3BQ9UBC3 853 aaKnown RBP16.94■□□□□ 0.3
MCF2L-211ENST00000413354 R3HCC1Q9Y3T6 440 aaKnown RBP16.94■□□□□ 0.3
MCF2L-211ENST00000413354 FAM237AA0A1B0GTK4 181 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 KPNA7A9QM74 516 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 SEC24AO95486 1093 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 ITGB3P05106 788 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 RHOP08100 348 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 PTPN2P17706 415 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 POLR2BP30876 1174 aaKnown RBP16.93■□□□□ 0.3
MCF2L-211ENST00000413354 HOXD13P35453 343 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 NTHL1P78549 312 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 PSMD2Q13200 908 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 IQCEQ6IPM2 695 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 RNF19BQ6ZMZ0 732 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 NELFCDQ8IXH7 590 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 C1orf127Q8N9H9 656 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 LEMD2Q8NC56 503 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 PDE11AQ9HCR9 933 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 SLC39A2Q9NP94 309 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 HCFC1R1Q9NWW0 138 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 RAPGEFL1Q9UHV5 662 aa16.93■□□□□ 0.3
MCF2L-211ENST00000413354 MRPS23Q9Y3D9 190 aaKnown RBP16.93■□□□□ 0.3
MCF2L-211ENST00000413354 ANHXE9PGG2 379 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 ZNF197O14709 1029 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 TGFB1I1O43294 461 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 TNNC2P02585 160 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 WNT7BP56706 349 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 RBP5P82980 135 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 TWF1Q12792 350 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 SMARCB1Q12824 385 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 HTR4Q13639 388 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 KNOP1Q1ED39 458 aaKnown RBP16.92■□□□□ 0.3
MCF2L-211ENST00000413354 CBWD2Q8IUF1 395 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 C12orf56Q8IXR9 622 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 FSIP1Q8NA03 581 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 XXYLT1Q8NBI6 393 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 FGF13Q92913 245 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 CHAMP1Q96JM3 812 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 ZNF512Q96ME7 567 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-211ENST00000413354 MTMR12Q9C0I1 747 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 INTS13Q9NVM9 706 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 GDE1Q9NZC3 331 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 HSFX1Q9UBD0 423 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 AGAP1Q9UPQ3 857 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 YIPF1Q9Y548 306 aa16.92■□□□□ 0.3
MCF2L-211ENST00000413354 MTMR11A4FU01 709 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 KLRC4O43908 158 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 PRPF40AO75400 957 aaKnown RBP16.91■□□□□ 0.3
MCF2L-211ENST00000413354 KRT19P08727 400 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 OR4Q2P0C623 313 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 SRFP11831 508 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 CYP2J2P51589 502 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 NDUFA8P51970 172 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 SNRNP35Q16560 246 aaKnown RBP16.91■□□□□ 0.3
MCF2L-211ENST00000413354 DUOXA2Q1HG44 320 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 CYP4A22Q5TCH4 519 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 PDZD4Q76G19 769 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-211ENST00000413354 WDR49Q8IV35 697 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 NPAS3Q8IXF0 933 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 CSGALNACT2Q8N6G5 542 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 ITFG1Q8TB96 612 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 SPATA18Q8TC71 538 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 C2orf15Q8WU43 125 aaKnown RBP16.91■□□□□ 0.3
MCF2L-211ENST00000413354 PGLYRP2Q96PD5 576 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 FNBP1Q96RU3 617 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 PRRX2Q99811 253 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 CORO1BQ9BR76 489 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 MFSD1Q9H3U5 465 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 SMOC2Q9H3U7 446 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 FBXL21Q9UKT6 434 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 MUC6Q6W4X9 2439 aa16.91■□□□□ 0.3
MCF2L-211ENST00000413354 CLIC2O15247 247 aa16.9■□□□□ 0.3
MCF2L-211ENST00000413354 HUS1O60921 280 aa16.9■□□□□ 0.3
MCF2L-211ENST00000413354 MICAL2O94851 1124 aa16.9■□□□□ 0.3
MCF2L-211ENST00000413354 KIF20AO95235 890 aa16.9■□□□□ 0.3
MCF2L-211ENST00000413354 ALDH1A3P47895 512 aa16.9■□□□□ 0.3
MCF2L-211ENST00000413354 EPHB3P54753 998 aa16.9■□□□□ 0.3
MCF2L-211ENST00000413354 TSPY1Q01534 308 aa16.9■□□□□ 0.3
MCF2L-211ENST00000413354 BFSP1Q12934 665 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms