RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 PROM1O43490 865 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 PPP3CBP16298 524 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 MALP21145 153 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 GRIA3P42263 894 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 PHKA1P46020 1223 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 PROK1P58294 105 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 PSMC1P62191 440 aaKnown RBP2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 AMPD3Q01432 767 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 DSC2Q02487 901 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 SNAPC2Q13487 334 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 PTPN21Q16825 1174 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 KHDC1Q4VXA5 237 aaKnown RBP2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 TSTD2Q5T7W7 516 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 RNF187Q5TA31 235 aaPredicted RBP2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 TAPT1Q6NXT6 567 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 SLC30A10Q6XR72 485 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 TMPRSS9Q7Z410 1059 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 PNMA8AQ86V59 439 aaPredicted RBP2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 PRPF38AQ8NAV1 312 aaKnown RBP2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 SNX19Q92543 992 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 UROC1Q96N76 676 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 TRIB1Q96RU8 372 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 SMOC2Q9H3U7 446 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 MRPS18AQ9NVS2 196 aaKnown RBP2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 NEU2Q9Y3R4 380 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 ENTPD2Q9Y5L3 495 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 TNKSO95271 1327 aa2.67□□□□□ -1.98
RNU2-54P-201ENST00000410299 CACNA1IQ9P0X4 2223 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 CCDC151A5D8V7 595 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 PRSS29PA6NIE9 313 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 LINC00473A8K010 186 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 ZNF785A8K8V0 405 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 NT5C1B-RDH14C9J2C7 533 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 POLRMTO00411 1230 aaKnown RBP2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 IGSF3O75054 1194 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 GJB1P08034 283 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 RHOP08100 348 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 GPD1P21695 349 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 LPOP22079 712 aaPredicted RBP2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 NPTX2P47972 431 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 ADKP55263 362 aaKnown RBP2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 POU6F2P78424 691 aaPredicted RBP2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 PIGFQ07326 219 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 FOXF2Q12947 444 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 HLXQ14774 488 aaPredicted RBP2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 PTPRRQ15256 657 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 TXNRD1Q16881 649 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 NBPF8Q3BBV2 869 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 CCDC93Q567U6 631 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 EFCAB2Q5VUJ9 269 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 PPP4R3AQ6IN85 833 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 SLC4A10Q6U841 1118 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 ZNF788Q6ZQV5 615 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 MICALCLQ6ZW33 695 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 GRASPQ7Z6J2 395 aaPredicted RBP2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 AMIGO2Q86SJ2 522 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 TTC7BQ86TV6 843 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 FAM9AQ8IZU1 332 aaPredicted RBP2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 SH2D3CQ8N5H7 860 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 AOPEPQ8N6M6 819 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 B3GALNT2Q8NCR0 500 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 PGBD1Q96JS3 809 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 SMAD5Q99717 465 aaKnown RBP2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 SMOQ99835 787 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 C1orf43Q9BWL3 253 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 BRD9Q9H8M2 597 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 SLAMF7Q9NQ25 335 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 PCDHA3Q9Y5H8 950 aa2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 CFAP20Q9Y6A4 193 aaKnown RBP2.66□□□□□ -1.98
RNU2-54P-201ENST00000410299 FNDC1Q4ZHG4 1894 aaPredicted RBP2.65□□□□□ -1.98
RNU2-54P-201ENST00000410299 A0A0B4J269 797 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 F5H697 171 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 ORC4O43929 436 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 VPS4BO75351 444 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 PROP1O75360 226 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 ZRANB2O95218 330 aaKnown RBP eCLIP2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 ANXA1P04083 346 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 RPLP2P05387 115 aaKnown RBP2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 CDK4P11802 303 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 CHRM3P20309 590 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 CCND1P24385 295 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 ITPKBP27987 946 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 SMARCA1P28370 1054 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 CYP2C19P33261 490 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 ABCG1P45844 678 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 ZNF135P52742 658 aaPredicted RBP2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 KRT85P78386 507 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 EXOSC10Q01780 885 aaKnown RBP2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 TUBB3Q13509 450 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 TAF2Q6P1X5 1199 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 PDSS2Q86YH6 399 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 RASAL3Q86YV0 1011 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 SRRM1Q8IYB3 904 aaKnown RBP2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 PSD4Q8NDX1 1056 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 POC1BQ8TC44 478 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 DDB2Q92466 427 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 SCAMP4Q969E2 229 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 SARAFQ96BY9 339 aa2.65□□□□□ -1.99
RNU2-54P-201ENST00000410299 TIMP4Q99727 224 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms