RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 METTL5Q9NRN9 209 aaKnown RBP12.07□□□□□ -0.48
SNX13-202ENST00000409604 TRAF3IP3Q9Y228 551 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 ATP8A1Q9Y2Q0 1164 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 MYADML2A6NDP7 307 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 POC1B-GALNT4F8VUJ3 575 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 H0YHG0 523 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 DYNC1I1O14576 645 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 CST3P01034 146 aaPredicted RBP12.07□□□□□ -0.48
SNX13-202ENST00000409604 TLE2Q04725 743 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 SNX17Q15036 470 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 RUFY4Q6ZNE9 571 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 LRRC55Q6ZSA7 311 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 TMEM130Q8N3G9 435 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 PAWRQ96IZ0 340 aaKnown RBP12.07□□□□□ -0.48
SNX13-202ENST00000409604 AGAP3Q96P47 875 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 ERGIC2Q96RQ1 377 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 TBK1Q9UHD2 729 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 NFASCO94856 1347 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 C4AP0C0L4 1744 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 CCDC130P13994 396 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 IGFBP4P22692 258 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 ACCSLQ4AC99 568 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 WSCD1Q658N2 575 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 CC2D1AQ6P1N0 951 aaPredicted RBP12.07□□□□□ -0.48
SNX13-202ENST00000409604 GIPC2Q8TF65 315 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 CGRRF1Q99675 332 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 CCDC77Q9BR77 488 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 BRWD3Q6RI45 1802 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 SLC10A3P09131 477 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 FGFR1P11362 822 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 YWHAGP61981 247 aaKnown RBP eCLIP12.06□□□□□ -0.48
SNX13-202ENST00000409604 SPIRE1Q08AE8 756 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 KRT71Q3SY84 523 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 SV2CQ496J9 727 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 FAM182AQ5T1J6 154 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 TTC19Q6DKK2 380 aaPredicted RBP12.06□□□□□ -0.48
SNX13-202ENST00000409604 PHLDB3Q6NSJ2 640 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 SRGAP1Q7Z6B7 1085 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 IRF2BP1Q8IU81 584 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 NETO2Q8NC67 525 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 MS4A4AQ96JQ5 239 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.06□□□□□ -0.48
SNX13-202ENST00000409604 DDX20Q9UHI6 824 aaKnown RBP12.06□□□□□ -0.48
SNX13-202ENST00000409604 PHLPP2Q6ZVD8 1323 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 EIF3CLB5ME19 914 aaKnown RBP12.06□□□□□ -0.48
SNX13-202ENST00000409604 OR4Q2P0C623 313 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 KRT15P19012 456 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 ACLYP53396 1101 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 FAM131BQ86XD5 332 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 B3GALT6Q96L58 329 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 EIF3CQ99613 913 aaKnown RBP12.06□□□□□ -0.48
SNX13-202ENST00000409604 ACO2Q99798 780 aaKnown RBP12.06□□□□□ -0.48
SNX13-202ENST00000409604 ENTPD7Q9NQZ7 604 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 SLC38A7Q9NVC3 462 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 CACNA1SQ13698 1873 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 GTF2BQ00403 316 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 DCAF4L1Q3SXM0 396 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 BBS9Q3SYG4 887 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 NT5DC1Q5TFE4 455 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 RHOT2Q8IXI1 618 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 RIN2Q8WYP3 895 aaPredicted RBP12.06□□□□□ -0.48
SNX13-202ENST00000409604 TRIM11Q96F44 468 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 CYP4F11Q9HBI6 524 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 TUBGCP4Q9UGJ1 667 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 PLAGL2Q9UPG8 496 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 SLC27A5Q9Y2P5 690 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 TRIOBPQ9H2D6 2365 aa12.06□□□□□ -0.48
SNX13-202ENST00000409604 ADGRA3Q8IWK6 1321 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 TTLL13PA6NNM8 815 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 F8VZ95 297 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 COMTP21964 271 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 ZNF697Q5TEC3 545 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 PALM2Q8IXS6 379 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 SLC2A14Q8TDB8 520 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 RNF39Q9H2S5 420 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 DAAM1Q9Y4D1 1078 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 TLL2Q9Y6L7 1015 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 CAPN6Q9Y6Q1 641 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 CLDN5O00501 218 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 CALB1P05937 261 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 BDNFP23560 247 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 SEPT6Q14141 434 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 TDRD10Q5VZ19 366 aaKnown RBP12.05□□□□□ -0.48
SNX13-202ENST00000409604 OVOS1Q6IE37 1185 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 C7orf61Q8IZ16 206 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 ANKRD42Q8N9B4 389 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 GCNAQ96QF7 691 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
SNX13-202ENST00000409604 MTIF3Q9H2K0 278 aaKnown RBP12.05□□□□□ -0.48
SNX13-202ENST00000409604 TAS2R14Q9NYV8 317 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 AMACRQ9UHK6 382 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 SLC12A6Q9UHW9 1150 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 SCINQ9Y6U3 715 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 UMODL1Q5DID0 1318 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 ARHGEF37A1IGU5 675 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 MCF2LO15068 1137 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 FAM200BP0CF97 657 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 ATF2P15336 505 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 SULT1E1P49888 294 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms